Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CNOT3O75175 AC087499.1-201ENST00000418141 1075 ntBASIC18.52■□□□□ 0.56
CNOT3O75175 AL355355.2-201ENST00000442321 338 ntBASIC18.52■□□□□ 0.56
CNOT3O75175 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CNOT3O75175 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CNOT3O75175 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT3O75175 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.52■□□□□ 0.55
CNOT3O75175 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNOT3O75175 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNOT3O75175 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CNOT3O75175 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNOT3O75175 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNOT3O75175 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.52■□□□□ 0.55
CNOT3O75175 NEFHP1-201ENST00000412845 2629 ntBASIC18.52■□□□□ 0.55
CNOT3O75175 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.51■□□□□ 0.55
CNOT3O75175 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CNOT3O75175 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.51■□□□□ 0.55
CNOT3O75175 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CNOT3O75175 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CNOT3O75175 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 NIFKP9-201ENST00000419265 221 ntBASIC18.51■□□□□ 0.55
CNOT3O75175 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.51■□□□□ 0.55
CNOT3O75175 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.51■□□□□ 0.55
CNOT3O75175 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.51■□□□□ 0.55
CNOT3O75175 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.51■□□□□ 0.55
CNOT3O75175 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.51■□□□□ 0.55
CNOT3O75175 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CNOT3O75175 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CNOT3O75175 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.51■□□□□ 0.55
CNOT3O75175 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
CNOT3O75175 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.51■□□□□ 0.55
CNOT3O75175 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT3O75175 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CNOT3O75175 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.5■□□□□ 0.55
CNOT3O75175 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.5■□□□□ 0.55
CNOT3O75175 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CNOT3O75175 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.5■□□□□ 0.55
CNOT3O75175 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.5■□□□□ 0.55
CNOT3O75175 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.5■□□□□ 0.55
CNOT3O75175 C1QL1P1-201ENST00000568105 661 ntBASIC18.5■□□□□ 0.55
CNOT3O75175 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.5■□□□□ 0.55
CNOT3O75175 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.5■□□□□ 0.55
CNOT3O75175 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.5■□□□□ 0.55
CNOT3O75175 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT3O75175 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CNOT3O75175 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CNOT3O75175 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT3O75175 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
CNOT3O75175 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CNOT3O75175 NUDT16P1-203ENST00000513809 620 ntBASIC18.49■□□□□ 0.55
CNOT3O75175 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.49■□□□□ 0.55
CNOT3O75175 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT3O75175 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.49■□□□□ 0.55
CNOT3O75175 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.49■□□□□ 0.55
CNOT3O75175 REXO1L10P-201ENST00000615707 1290 ntBASIC18.49■□□□□ 0.55
CNOT3O75175 CR392000.1-201ENST00000624770 1228 ntBASIC18.49■□□□□ 0.55
CNOT3O75175 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT3O75175 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT3O75175 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.49■□□□□ 0.55
CNOT3O75175 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CNOT3O75175 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT3O75175 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CNOT3O75175 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CNOT3O75175 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms