Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TSPAN3O60637 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.71■□□□□ 0.75
TSPAN3O60637 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 FAM87A-204ENST00000613235 858 ntBASIC19.71■□□□□ 0.75
TSPAN3O60637 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSPAN3O60637 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.7■□□□□ 0.74
TSPAN3O60637 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.7■□□□□ 0.74
TSPAN3O60637 TERF1P1-201ENST00000311003 1181 ntBASIC19.7■□□□□ 0.74
TSPAN3O60637 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TSPAN3O60637 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
TSPAN3O60637 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 CCR12P-201ENST00000446203 998 ntBASIC19.7■□□□□ 0.74
TSPAN3O60637 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.7■□□□□ 0.74
TSPAN3O60637 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.7■□□□□ 0.74
TSPAN3O60637 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TSPAN3O60637 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.7■□□□□ 0.74
TSPAN3O60637 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSPAN3O60637 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSPAN3O60637 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSPAN3O60637 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.69■□□□□ 0.74
TSPAN3O60637 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
TSPAN3O60637 Z82202.1-201ENST00000623446 1880 ntBASIC19.69■□□□□ 0.74
TSPAN3O60637 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TSPAN3O60637 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.69■□□□□ 0.74
TSPAN3O60637 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSPAN3O60637 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSPAN3O60637 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSPAN3O60637 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.69■□□□□ 0.74
TSPAN3O60637 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.69■□□□□ 0.74
TSPAN3O60637 SLC25A1P2-201ENST00000430693 912 ntBASIC19.69■□□□□ 0.74
TSPAN3O60637 AC007663.1-201ENST00000438948 1240 ntBASIC19.69■□□□□ 0.74
TSPAN3O60637 TSPY23P-201ENST00000440136 739 ntBASIC19.69■□□□□ 0.74
TSPAN3O60637 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.69■□□□□ 0.74
TSPAN3O60637 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TSPAN3O60637 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TSPAN3O60637 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSPAN3O60637 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TSPAN3O60637 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TSPAN3O60637 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.68■□□□□ 0.74
TSPAN3O60637 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TSPAN3O60637 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
TSPAN3O60637 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
TSPAN3O60637 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TSPAN3O60637 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.68■□□□□ 0.74
TSPAN3O60637 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.68■□□□□ 0.74
TSPAN3O60637 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TSPAN3O60637 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.68■□□□□ 0.74
TSPAN3O60637 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TSPAN3O60637 LIN28AP1-201ENST00000429574 405 ntBASIC19.68■□□□□ 0.74
TSPAN3O60637 ATP5G1P1-201ENST00000448724 379 ntBASIC19.68■□□□□ 0.74
TSPAN3O60637 PRSS44-201ENST00000515154 1146 ntBASIC19.68■□□□□ 0.74
TSPAN3O60637 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TSPAN3O60637 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.68■□□□□ 0.74
TSPAN3O60637 AC092865.7-201ENST00000641832 219 ntBASIC19.68■□□□□ 0.74
TSPAN3O60637 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TSPAN3O60637 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.68■□□□□ 0.74
TSPAN3O60637 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.68■□□□□ 0.74
TSPAN3O60637 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TSPAN3O60637 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.67■□□□□ 0.74
TSPAN3O60637 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TSPAN3O60637 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TSPAN3O60637 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.67■□□□□ 0.74
TSPAN3O60637 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.67■□□□□ 0.74
TSPAN3O60637 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.67■□□□□ 0.74
TSPAN3O60637 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.67■□□□□ 0.74
TSPAN3O60637 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 AL023803.3-201ENST00000615559 522 ntBASIC19.67■□□□□ 0.74
TSPAN3O60637 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
TSPAN3O60637 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TSPAN3O60637 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TSPAN3O60637 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms