Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.62■□□□□ 0.41
TO15178 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TO15178 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.62■□□□□ 0.41
TO15178 AL355075.4-201ENST00000554988 638 ntBASIC17.62■□□□□ 0.41
TO15178 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TO15178 AP005242.2-201ENST00000580065 1175 ntBASIC17.62■□□□□ 0.41
TO15178 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TO15178 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.62■□□□□ 0.41
TO15178 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.62■□□□□ 0.41
TO15178 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TO15178 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TO15178 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TO15178 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TO15178 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.62■□□□□ 0.41
TO15178 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.62■□□□□ 0.41
TO15178 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TO15178 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TO15178 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.62■□□□□ 0.41
TO15178 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.61■□□□□ 0.41
TO15178 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TO15178 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 FEM1AP3-201ENST00000403722 1741 ntBASIC17.61■□□□□ 0.41
TO15178 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.61■□□□□ 0.41
TO15178 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TO15178 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.61■□□□□ 0.41
TO15178 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.61■□□□□ 0.41
TO15178 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.61■□□□□ 0.41
TO15178 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.61■□□□□ 0.41
TO15178 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.61■□□□□ 0.41
TO15178 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.61■□□□□ 0.41
TO15178 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.61■□□□□ 0.41
TO15178 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TO15178 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TO15178 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TO15178 FP475955.4-201ENST00000623131 1990 ntBASIC17.6■□□□□ 0.41
TO15178 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.6■□□□□ 0.41
TO15178 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.6■□□□□ 0.41
TO15178 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.6■□□□□ 0.41
TO15178 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TO15178 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.6■□□□□ 0.41
TO15178 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.6■□□□□ 0.41
TO15178 AC097488.1-201ENST00000507834 756 ntBASIC17.6■□□□□ 0.41
TO15178 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.6■□□□□ 0.41
TO15178 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.6■□□□□ 0.41
TO15178 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.6■□□□□ 0.41
TO15178 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.6■□□□□ 0.41
TO15178 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.6■□□□□ 0.41
TO15178 AC079598.2-202ENST00000546624 1451 ntBASIC17.6■□□□□ 0.41
TO15178 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.6■□□□□ 0.41
TO15178 IRX1P1-201ENST00000438849 1838 ntBASIC17.6■□□□□ 0.41
TO15178 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.6■□□□□ 0.41
TO15178 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.6■□□□□ 0.41
TO15178 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.6■□□□□ 0.41
TO15178 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TO15178 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TO15178 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TO15178 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TO15178 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.59■□□□□ 0.41
TO15178 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.59■□□□□ 0.41
TO15178 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TO15178 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.59■□□□□ 0.41
TO15178 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.59■□□□□ 0.41
TO15178 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TO15178 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.59■□□□□ 0.41
TO15178 FITM1-202ENST00000559294 800 ntBASIC17.59■□□□□ 0.41
TO15178 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.59■□□□□ 0.41
TO15178 SLC25A1P4-201ENST00000567977 778 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms