Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 FP475955.4-201ENST00000623131 1990 ntBASIC17.07■□□□□ 0.32
TVP23AA6NH52 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 AL138781.2-201ENST00000617896 1843 ntBASIC17.07■□□□□ 0.32
TVP23AA6NH52 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TVP23AA6NH52 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 IRX1P1-201ENST00000438849 1838 ntBASIC17.06■□□□□ 0.32
TVP23AA6NH52 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.06■□□□□ 0.32
TVP23AA6NH52 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TVP23AA6NH52 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 AC090192.1-201ENST00000517740 490 ntBASIC17.05■□□□□ 0.32
TVP23AA6NH52 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.05■□□□□ 0.32
TVP23AA6NH52 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TVP23AA6NH52 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms