Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.59■□□□□ 0.41
CDHR4A6H8M9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDHR4A6H8M9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.58■□□□□ 0.41
CDHR4A6H8M9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDHR4A6H8M9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDHR4A6H8M9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 AC110285.5-201ENST00000611501 352 ntBASIC17.58■□□□□ 0.4
CDHR4A6H8M9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDHR4A6H8M9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 MIR4651-201ENST00000582622 73 ntBASIC17.57■□□□□ 0.4
CDHR4A6H8M9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDHR4A6H8M9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 POU5F1P3-201ENST00000428824 1078 ntBASIC17.56■□□□□ 0.4
CDHR4A6H8M9 AC128676.1-201ENST00000454392 318 ntBASIC17.56■□□□□ 0.4
CDHR4A6H8M9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDHR4A6H8M9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.55■□□□□ 0.4
CDHR4A6H8M9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.55■□□□□ 0.4
CDHR4A6H8M9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.55■□□□□ 0.4
CDHR4A6H8M9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms