Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 AC069148.1-201ENST00000608741 768 ntBASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 LINC01311-201ENST00000565162 1445 ntBASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV17A0A0B4J275 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 SDHAP1-207ENST00000440850 2000 ntBASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TRAV17A0A0B4J275 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 AC083849.1-201ENST00000615227 514 ntBASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV17A0A0B4J275 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV17A0A0B4J275 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV17A0A0B4J275 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 KRT18P48-201ENST00000434763 852 ntBASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 HYMAI.1-201ENST00000620949 238 ntBASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms