Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AireQ9Z0E3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AireQ9Z0E3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
AireQ9Z0E3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
AireQ9Z0E3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AireQ9Z0E3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.49■□□□□ 0.87
AireQ9Z0E3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AireQ9Z0E3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AireQ9Z0E3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
AireQ9Z0E3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AireQ9Z0E3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AireQ9Z0E3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AireQ9Z0E3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AireQ9Z0E3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AireQ9Z0E3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AireQ9Z0E3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
AireQ9Z0E3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AireQ9Z0E3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AireQ9Z0E3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
AireQ9Z0E3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.46■□□□□ 0.87
AireQ9Z0E3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AireQ9Z0E3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AireQ9Z0E3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AireQ9Z0E3 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.44■□□□□ 0.86
AireQ9Z0E3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
AireQ9Z0E3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.44■□□□□ 0.86
AireQ9Z0E3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.43■□□□□ 0.86
AireQ9Z0E3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
AireQ9Z0E3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AireQ9Z0E3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AireQ9Z0E3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
AireQ9Z0E3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AireQ9Z0E3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AireQ9Z0E3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AireQ9Z0E3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AireQ9Z0E3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
AireQ9Z0E3 Gm7432-201ENSMUST00000210343 879 ntBASIC20.41■□□□□ 0.86
AireQ9Z0E3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AireQ9Z0E3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AireQ9Z0E3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.4■□□□□ 0.86
AireQ9Z0E3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
AireQ9Z0E3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.4■□□□□ 0.86
AireQ9Z0E3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AireQ9Z0E3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AireQ9Z0E3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
AireQ9Z0E3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AireQ9Z0E3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AireQ9Z0E3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AireQ9Z0E3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.38■□□□□ 0.85
AireQ9Z0E3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
AireQ9Z0E3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
AireQ9Z0E3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
AireQ9Z0E3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
AireQ9Z0E3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AireQ9Z0E3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
AireQ9Z0E3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
AireQ9Z0E3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AireQ9Z0E3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AireQ9Z0E3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AireQ9Z0E3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
AireQ9Z0E3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
AireQ9Z0E3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AireQ9Z0E3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.36■□□□□ 0.85
AireQ9Z0E3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
AireQ9Z0E3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
AireQ9Z0E3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AireQ9Z0E3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AireQ9Z0E3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AireQ9Z0E3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
AireQ9Z0E3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AireQ9Z0E3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.34■□□□□ 0.85
AireQ9Z0E3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
AireQ9Z0E3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AireQ9Z0E3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.33■□□□□ 0.85
AireQ9Z0E3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
AireQ9Z0E3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
AireQ9Z0E3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AireQ9Z0E3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
AireQ9Z0E3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AireQ9Z0E3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AireQ9Z0E3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
AireQ9Z0E3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.32■□□□□ 0.84
AireQ9Z0E3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AireQ9Z0E3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AireQ9Z0E3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AireQ9Z0E3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AireQ9Z0E3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AireQ9Z0E3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
AireQ9Z0E3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AireQ9Z0E3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.3■□□□□ 0.84
AireQ9Z0E3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AireQ9Z0E3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AireQ9Z0E3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
AireQ9Z0E3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AireQ9Z0E3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AireQ9Z0E3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.28■□□□□ 0.84
AireQ9Z0E3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AireQ9Z0E3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AireQ9Z0E3 Gm11599-201ENSMUST00000118720 878 ntBASIC20.27■□□□□ 0.84
AireQ9Z0E3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms