Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.78■□□□□ 0.92
Sec61a2Q9JLR1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a2Q9JLR1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a2Q9JLR1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a2Q9JLR1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a2Q9JLR1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a2Q9JLR1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.77■□□□□ 0.92
Sec61a2Q9JLR1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sec61a2Q9JLR1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.76■□□□□ 0.91
Sec61a2Q9JLR1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sec61a2Q9JLR1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Sec61a2Q9JLR1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sec61a2Q9JLR1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Sec61a2Q9JLR1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sec61a2Q9JLR1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sec61a2Q9JLR1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sec61a2Q9JLR1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Sec61a2Q9JLR1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sec61a2Q9JLR1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sec61a2Q9JLR1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a2Q9JLR1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a2Q9JLR1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a2Q9JLR1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a2Q9JLR1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.72■□□□□ 0.91
Sec61a2Q9JLR1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.72■□□□□ 0.91
Sec61a2Q9JLR1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sec61a2Q9JLR1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sec61a2Q9JLR1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sec61a2Q9JLR1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sec61a2Q9JLR1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec61a2Q9JLR1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a2Q9JLR1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a2Q9JLR1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a2Q9JLR1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.69■□□□□ 0.9
Sec61a2Q9JLR1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a2Q9JLR1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a2Q9JLR1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a2Q9JLR1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sec61a2Q9JLR1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec61a2Q9JLR1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec61a2Q9JLR1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec61a2Q9JLR1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec61a2Q9JLR1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.67■□□□□ 0.9
Sec61a2Q9JLR1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.66■□□□□ 0.9
Sec61a2Q9JLR1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sec61a2Q9JLR1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sec61a2Q9JLR1 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.63■□□□□ 0.89
Sec61a2Q9JLR1 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.63■□□□□ 0.89
Sec61a2Q9JLR1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sec61a2Q9JLR1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sec61a2Q9JLR1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.63■□□□□ 0.89
Sec61a2Q9JLR1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sec61a2Q9JLR1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a2Q9JLR1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a2Q9JLR1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a2Q9JLR1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a2Q9JLR1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a2Q9JLR1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a2Q9JLR1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a2Q9JLR1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sec61a2Q9JLR1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sec61a2Q9JLR1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sec61a2Q9JLR1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sec61a2Q9JLR1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a2Q9JLR1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a2Q9JLR1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a2Q9JLR1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a2Q9JLR1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Sec61a2Q9JLR1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a2Q9JLR1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a2Q9JLR1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a2Q9JLR1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sec61a2Q9JLR1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sec61a2Q9JLR1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sec61a2Q9JLR1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sec61a2Q9JLR1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a2Q9JLR1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a2Q9JLR1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a2Q9JLR1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a2Q9JLR1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sec61a2Q9JLR1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sec61a2Q9JLR1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a2Q9JLR1 Particl-201ENSMUST00000205370 1560 ntBASIC20.55■□□□□ 0.88
Sec61a2Q9JLR1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a2Q9JLR1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.55■□□□□ 0.88
Sec61a2Q9JLR1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sec61a2Q9JLR1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sec61a2Q9JLR1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.53■□□□□ 0.88
Sec61a2Q9JLR1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Sec61a2Q9JLR1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Sec61a2Q9JLR1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.53■□□□□ 0.88
Sec61a2Q9JLR1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms