Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ap3s1Q9DCR2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ap3s1Q9DCR2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ap3s1Q9DCR2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ap3s1Q9DCR2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ap3s1Q9DCR2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ap3s1Q9DCR2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.68■□□□□ 0.9
Ap3s1Q9DCR2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ap3s1Q9DCR2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ap3s1Q9DCR2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ap3s1Q9DCR2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ap3s1Q9DCR2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap3s1Q9DCR2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ap3s1Q9DCR2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ap3s1Q9DCR2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap3s1Q9DCR2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap3s1Q9DCR2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap3s1Q9DCR2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ap3s1Q9DCR2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ap3s1Q9DCR2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ap3s1Q9DCR2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ap3s1Q9DCR2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ap3s1Q9DCR2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ap3s1Q9DCR2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ap3s1Q9DCR2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ap3s1Q9DCR2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ap3s1Q9DCR2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ap3s1Q9DCR2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ap3s1Q9DCR2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.63■□□□□ 0.89
Ap3s1Q9DCR2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ap3s1Q9DCR2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ap3s1Q9DCR2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ap3s1Q9DCR2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ap3s1Q9DCR2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ap3s1Q9DCR2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ap3s1Q9DCR2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ap3s1Q9DCR2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.61■□□□□ 0.89
Ap3s1Q9DCR2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ap3s1Q9DCR2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ap3s1Q9DCR2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ap3s1Q9DCR2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ap3s1Q9DCR2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.6■□□□□ 0.89
Ap3s1Q9DCR2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ap3s1Q9DCR2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ap3s1Q9DCR2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ap3s1Q9DCR2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ap3s1Q9DCR2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ap3s1Q9DCR2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ap3s1Q9DCR2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.58■□□□□ 0.89
Ap3s1Q9DCR2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ap3s1Q9DCR2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ap3s1Q9DCR2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ap3s1Q9DCR2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ap3s1Q9DCR2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ap3s1Q9DCR2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Ap3s1Q9DCR2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ap3s1Q9DCR2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ap3s1Q9DCR2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ap3s1Q9DCR2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.56■□□□□ 0.88
Ap3s1Q9DCR2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ap3s1Q9DCR2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.56■□□□□ 0.88
Ap3s1Q9DCR2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ap3s1Q9DCR2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.56■□□□□ 0.88
Ap3s1Q9DCR2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ap3s1Q9DCR2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ap3s1Q9DCR2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ap3s1Q9DCR2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ap3s1Q9DCR2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ap3s1Q9DCR2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap3s1Q9DCR2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ap3s1Q9DCR2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ap3s1Q9DCR2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ap3s1Q9DCR2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ap3s1Q9DCR2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ap3s1Q9DCR2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ap3s1Q9DCR2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Ap3s1Q9DCR2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ap3s1Q9DCR2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Ap3s1Q9DCR2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ap3s1Q9DCR2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ap3s1Q9DCR2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ap3s1Q9DCR2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Ap3s1Q9DCR2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ap3s1Q9DCR2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms