Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssr3Q9DCF9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssr3Q9DCF9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssr3Q9DCF9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ssr3Q9DCF9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ssr3Q9DCF9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.72■□□□□ 0.91
Ssr3Q9DCF9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.72■□□□□ 0.91
Ssr3Q9DCF9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ssr3Q9DCF9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ssr3Q9DCF9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssr3Q9DCF9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.71■□□□□ 0.91
Ssr3Q9DCF9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssr3Q9DCF9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssr3Q9DCF9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ssr3Q9DCF9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr3Q9DCF9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr3Q9DCF9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr3Q9DCF9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ssr3Q9DCF9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr3Q9DCF9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ssr3Q9DCF9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr3Q9DCF9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr3Q9DCF9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr3Q9DCF9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr3Q9DCF9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr3Q9DCF9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ssr3Q9DCF9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr3Q9DCF9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr3Q9DCF9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr3Q9DCF9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr3Q9DCF9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr3Q9DCF9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr3Q9DCF9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr3Q9DCF9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr3Q9DCF9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr3Q9DCF9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr3Q9DCF9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr3Q9DCF9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssr3Q9DCF9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssr3Q9DCF9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr3Q9DCF9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.63■□□□□ 0.89
Ssr3Q9DCF9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr3Q9DCF9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ssr3Q9DCF9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr3Q9DCF9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr3Q9DCF9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr3Q9DCF9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr3Q9DCF9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr3Q9DCF9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr3Q9DCF9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr3Q9DCF9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr3Q9DCF9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.59■□□□□ 0.89
Ssr3Q9DCF9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ssr3Q9DCF9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr3Q9DCF9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Ssr3Q9DCF9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr3Q9DCF9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr3Q9DCF9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr3Q9DCF9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ssr3Q9DCF9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr3Q9DCF9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr3Q9DCF9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr3Q9DCF9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr3Q9DCF9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ssr3Q9DCF9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ssr3Q9DCF9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr3Q9DCF9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr3Q9DCF9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr3Q9DCF9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr3Q9DCF9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr3Q9DCF9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.57■□□□□ 0.88
Ssr3Q9DCF9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr3Q9DCF9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr3Q9DCF9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ssr3Q9DCF9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.56■□□□□ 0.88
Ssr3Q9DCF9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr3Q9DCF9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.55■□□□□ 0.88
Ssr3Q9DCF9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr3Q9DCF9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr3Q9DCF9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr3Q9DCF9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms