Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pfdn1Q9CWM4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pfdn1Q9CWM4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pfdn1Q9CWM4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pfdn1Q9CWM4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.44■□□□□ 0.86
Pfdn1Q9CWM4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pfdn1Q9CWM4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.43■□□□□ 0.86
Pfdn1Q9CWM4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pfdn1Q9CWM4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pfdn1Q9CWM4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pfdn1Q9CWM4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.43■□□□□ 0.86
Pfdn1Q9CWM4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pfdn1Q9CWM4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pfdn1Q9CWM4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pfdn1Q9CWM4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pfdn1Q9CWM4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pfdn1Q9CWM4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pfdn1Q9CWM4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.42■□□□□ 0.86
Pfdn1Q9CWM4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.42■□□□□ 0.86
Pfdn1Q9CWM4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pfdn1Q9CWM4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.41■□□□□ 0.86
Pfdn1Q9CWM4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pfdn1Q9CWM4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pfdn1Q9CWM4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.41■□□□□ 0.86
Pfdn1Q9CWM4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pfdn1Q9CWM4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pfdn1Q9CWM4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.4■□□□□ 0.86
Pfdn1Q9CWM4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pfdn1Q9CWM4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pfdn1Q9CWM4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pfdn1Q9CWM4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pfdn1Q9CWM4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pfdn1Q9CWM4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pfdn1Q9CWM4 Gm25238-201ENSMUST00000174914 89 ntBASIC20.38■□□□□ 0.85
Pfdn1Q9CWM4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pfdn1Q9CWM4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pfdn1Q9CWM4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pfdn1Q9CWM4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pfdn1Q9CWM4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pfdn1Q9CWM4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pfdn1Q9CWM4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pfdn1Q9CWM4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pfdn1Q9CWM4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pfdn1Q9CWM4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pfdn1Q9CWM4 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.35■□□□□ 0.85
Pfdn1Q9CWM4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.35■□□□□ 0.85
Pfdn1Q9CWM4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.34■□□□□ 0.85
Pfdn1Q9CWM4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn1Q9CWM4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn1Q9CWM4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pfdn1Q9CWM4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn1Q9CWM4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn1Q9CWM4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Pfdn1Q9CWM4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn1Q9CWM4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn1Q9CWM4 Rab21-202ENSMUST00000218831 843 ntBASIC20.32■□□□□ 0.84
Pfdn1Q9CWM4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn1Q9CWM4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.31■□□□□ 0.84
Pfdn1Q9CWM4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn1Q9CWM4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn1Q9CWM4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Pfdn1Q9CWM4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn1Q9CWM4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Pfdn1Q9CWM4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.3■□□□□ 0.84
Pfdn1Q9CWM4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Pfdn1Q9CWM4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pfdn1Q9CWM4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn1Q9CWM4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Pfdn1Q9CWM4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn1Q9CWM4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn1Q9CWM4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn1Q9CWM4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn1Q9CWM4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn1Q9CWM4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pfdn1Q9CWM4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn1Q9CWM4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn1Q9CWM4 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.26■□□□□ 0.83
Pfdn1Q9CWM4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn1Q9CWM4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn1Q9CWM4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Pfdn1Q9CWM4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn1Q9CWM4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pfdn1Q9CWM4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn1Q9CWM4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn1Q9CWM4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.25■□□□□ 0.83
Pfdn1Q9CWM4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn1Q9CWM4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn1Q9CWM4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
Pfdn1Q9CWM4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn1Q9CWM4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn1Q9CWM4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms