Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tmc1Q8R4P5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tmc1Q8R4P5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Tmc1Q8R4P5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Tmc1Q8R4P5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Tmc1Q8R4P5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Tmc1Q8R4P5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tmc1Q8R4P5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tmc1Q8R4P5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC28.53■■■□□ 2.16
Tmc1Q8R4P5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.53■■■□□ 2.16
Tmc1Q8R4P5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tmc1Q8R4P5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tmc1Q8R4P5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Tmc1Q8R4P5 Gm17641-201ENSMUST00000166328 2350 ntBASIC28.51■■■□□ 2.15
Tmc1Q8R4P5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.5■■■□□ 2.15
Tmc1Q8R4P5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tmc1Q8R4P5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
Tmc1Q8R4P5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.49■■■□□ 2.15
Tmc1Q8R4P5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tmc1Q8R4P5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tmc1Q8R4P5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tmc1Q8R4P5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Tmc1Q8R4P5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Tmc1Q8R4P5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tmc1Q8R4P5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Tmc1Q8R4P5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Tmc1Q8R4P5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
Tmc1Q8R4P5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Tmc1Q8R4P5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
Tmc1Q8R4P5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tmc1Q8R4P5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Tmc1Q8R4P5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tmc1Q8R4P5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Tmc1Q8R4P5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Tmc1Q8R4P5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC28.43■■■□□ 2.14
Tmc1Q8R4P5 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.42■■■□□ 2.14
Tmc1Q8R4P5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tmc1Q8R4P5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tmc1Q8R4P5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Tmc1Q8R4P5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Tmc1Q8R4P5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tmc1Q8R4P5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC28.39■■■□□ 2.14
Tmc1Q8R4P5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
Tmc1Q8R4P5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Tmc1Q8R4P5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tmc1Q8R4P5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Tmc1Q8R4P5 Particl-201ENSMUST00000205370 1560 ntBASIC28.37■■■□□ 2.13
Tmc1Q8R4P5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tmc1Q8R4P5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tmc1Q8R4P5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tmc1Q8R4P5 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.36■■■□□ 2.13
Tmc1Q8R4P5 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.36■■■□□ 2.13
Tmc1Q8R4P5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Tmc1Q8R4P5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tmc1Q8R4P5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tmc1Q8R4P5 Gm42699-201ENSMUST00000198104 1657 ntBASIC28.34■■■□□ 2.13
Tmc1Q8R4P5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Tmc1Q8R4P5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.33■■■□□ 2.13
Tmc1Q8R4P5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tmc1Q8R4P5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tmc1Q8R4P5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tmc1Q8R4P5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tmc1Q8R4P5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Tmc1Q8R4P5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Tmc1Q8R4P5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Tmc1Q8R4P5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tmc1Q8R4P5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tmc1Q8R4P5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tmc1Q8R4P5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tmc1Q8R4P5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tmc1Q8R4P5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Tmc1Q8R4P5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Tmc1Q8R4P5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.3■■■□□ 2.12
Tmc1Q8R4P5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Tmc1Q8R4P5 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.3■■■□□ 2.12
Tmc1Q8R4P5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tmc1Q8R4P5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.29■■■□□ 2.12
Tmc1Q8R4P5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tmc1Q8R4P5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tmc1Q8R4P5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Tmc1Q8R4P5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Tmc1Q8R4P5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Tmc1Q8R4P5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Tmc1Q8R4P5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Tmc1Q8R4P5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Tmc1Q8R4P5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Tmc1Q8R4P5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.23■■■□□ 2.11
Tmc1Q8R4P5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Tmc1Q8R4P5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
Tmc1Q8R4P5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Tmc1Q8R4P5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Tmc1Q8R4P5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms