Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gtf2a1lQ8R4I4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Gtf2a1lQ8R4I4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gtf2a1lQ8R4I4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gtf2a1lQ8R4I4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Gtf2a1lQ8R4I4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Gtf2a1lQ8R4I4 Gm7432-201ENSMUST00000210343 879 ntBASIC22.59■■□□□ 1.21
Gtf2a1lQ8R4I4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gtf2a1lQ8R4I4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gtf2a1lQ8R4I4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Gtf2a1lQ8R4I4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
Gtf2a1lQ8R4I4 Gm30023-201ENSMUST00000197970 889 ntBASIC22.58■■□□□ 1.21
Gtf2a1lQ8R4I4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Gtf2a1lQ8R4I4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Gtf2a1lQ8R4I4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Gtf2a1lQ8R4I4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.57■■□□□ 1.2
Gtf2a1lQ8R4I4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gtf2a1lQ8R4I4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gtf2a1lQ8R4I4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Gtf2a1lQ8R4I4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Gtf2a1lQ8R4I4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gtf2a1lQ8R4I4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Gtf2a1lQ8R4I4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Gtf2a1lQ8R4I4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Gtf2a1lQ8R4I4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gtf2a1lQ8R4I4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.55■■□□□ 1.2
Gtf2a1lQ8R4I4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.54■■□□□ 1.2
Gtf2a1lQ8R4I4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.54■■□□□ 1.2
Gtf2a1lQ8R4I4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gtf2a1lQ8R4I4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
Gtf2a1lQ8R4I4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Gtf2a1lQ8R4I4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gtf2a1lQ8R4I4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gtf2a1lQ8R4I4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Gtf2a1lQ8R4I4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gtf2a1lQ8R4I4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gtf2a1lQ8R4I4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Gtf2a1lQ8R4I4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Gtf2a1lQ8R4I4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gtf2a1lQ8R4I4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Gtf2a1lQ8R4I4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gtf2a1lQ8R4I4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.5■■□□□ 1.19
Gtf2a1lQ8R4I4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.5■■□□□ 1.19
Gtf2a1lQ8R4I4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gtf2a1lQ8R4I4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.49■■□□□ 1.19
Gtf2a1lQ8R4I4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.49■■□□□ 1.19
Gtf2a1lQ8R4I4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gtf2a1lQ8R4I4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gtf2a1lQ8R4I4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gtf2a1lQ8R4I4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Gtf2a1lQ8R4I4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gtf2a1lQ8R4I4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Gtf2a1lQ8R4I4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gtf2a1lQ8R4I4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Gtf2a1lQ8R4I4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.47■■□□□ 1.19
Gtf2a1lQ8R4I4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gtf2a1lQ8R4I4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Gtf2a1lQ8R4I4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gtf2a1lQ8R4I4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gtf2a1lQ8R4I4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.46■■□□□ 1.19
Gtf2a1lQ8R4I4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gtf2a1lQ8R4I4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Gtf2a1lQ8R4I4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.45■■□□□ 1.19
Gtf2a1lQ8R4I4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.45■■□□□ 1.18
Gtf2a1lQ8R4I4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gtf2a1lQ8R4I4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.44■■□□□ 1.18
Gtf2a1lQ8R4I4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Gtf2a1lQ8R4I4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.44■■□□□ 1.18
Gtf2a1lQ8R4I4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gtf2a1lQ8R4I4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gtf2a1lQ8R4I4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gtf2a1lQ8R4I4 Gm11599-201ENSMUST00000118720 878 ntBASIC22.43■■□□□ 1.18
Gtf2a1lQ8R4I4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gtf2a1lQ8R4I4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.42■■□□□ 1.18
Gtf2a1lQ8R4I4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Gtf2a1lQ8R4I4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gtf2a1lQ8R4I4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gtf2a1lQ8R4I4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.41■■□□□ 1.18
Gtf2a1lQ8R4I4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gtf2a1lQ8R4I4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gtf2a1lQ8R4I4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gtf2a1lQ8R4I4 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.41■■□□□ 1.18
Gtf2a1lQ8R4I4 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.41■■□□□ 1.18
Gtf2a1lQ8R4I4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Gtf2a1lQ8R4I4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gtf2a1lQ8R4I4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gtf2a1lQ8R4I4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gtf2a1lQ8R4I4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gtf2a1lQ8R4I4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gtf2a1lQ8R4I4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gtf2a1lQ8R4I4 Particl-201ENSMUST00000205370 1560 ntBASIC22.39■■□□□ 1.18
Gtf2a1lQ8R4I4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gtf2a1lQ8R4I4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gtf2a1lQ8R4I4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gtf2a1lQ8R4I4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.38■■□□□ 1.17
Gtf2a1lQ8R4I4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gtf2a1lQ8R4I4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gtf2a1lQ8R4I4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.37■■□□□ 1.17
Gtf2a1lQ8R4I4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gtf2a1lQ8R4I4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms