Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.81■□□□□ 0.92
Gm11541Q8C4D8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm11541Q8C4D8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gm11541Q8C4D8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11541Q8C4D8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11541Q8C4D8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11541Q8C4D8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11541Q8C4D8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11541Q8C4D8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11541Q8C4D8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.8■□□□□ 0.92
Gm11541Q8C4D8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Gm11541Q8C4D8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm11541Q8C4D8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm11541Q8C4D8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm11541Q8C4D8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm11541Q8C4D8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Gm11541Q8C4D8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm11541Q8C4D8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm11541Q8C4D8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm11541Q8C4D8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm11541Q8C4D8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11541Q8C4D8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Gm11541Q8C4D8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11541Q8C4D8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.77■□□□□ 0.92
Gm11541Q8C4D8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11541Q8C4D8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11541Q8C4D8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11541Q8C4D8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm11541Q8C4D8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm11541Q8C4D8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm11541Q8C4D8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Gm11541Q8C4D8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.75■□□□□ 0.91
Gm11541Q8C4D8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm11541Q8C4D8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm11541Q8C4D8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm11541Q8C4D8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Gm11541Q8C4D8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm11541Q8C4D8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm11541Q8C4D8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm11541Q8C4D8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm11541Q8C4D8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.71■□□□□ 0.91
Gm11541Q8C4D8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm11541Q8C4D8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm11541Q8C4D8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.69■□□□□ 0.9
Gm11541Q8C4D8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm11541Q8C4D8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm11541Q8C4D8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm11541Q8C4D8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm11541Q8C4D8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gm11541Q8C4D8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm11541Q8C4D8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm11541Q8C4D8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm11541Q8C4D8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm11541Q8C4D8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm11541Q8C4D8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm11541Q8C4D8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm11541Q8C4D8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm11541Q8C4D8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm11541Q8C4D8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Gm11541Q8C4D8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm11541Q8C4D8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm11541Q8C4D8 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.64■□□□□ 0.89
Gm11541Q8C4D8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm11541Q8C4D8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm11541Q8C4D8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm11541Q8C4D8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11541Q8C4D8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11541Q8C4D8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11541Q8C4D8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11541Q8C4D8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11541Q8C4D8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.63■□□□□ 0.89
Gm11541Q8C4D8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm11541Q8C4D8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm11541Q8C4D8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm11541Q8C4D8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.62■□□□□ 0.89
Gm11541Q8C4D8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm11541Q8C4D8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm11541Q8C4D8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm11541Q8C4D8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm11541Q8C4D8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gm11541Q8C4D8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Gm11541Q8C4D8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Gm11541Q8C4D8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11541Q8C4D8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm11541Q8C4D8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Gm11541Q8C4D8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11541Q8C4D8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm11541Q8C4D8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm11541Q8C4D8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11541Q8C4D8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm11541Q8C4D8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Gm11541Q8C4D8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm11541Q8C4D8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm11541Q8C4D8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gm11541Q8C4D8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.55■□□□□ 0.88
Gm11541Q8C4D8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11541Q8C4D8 Particl-201ENSMUST00000205370 1560 ntBASIC20.55■□□□□ 0.88
Gm11541Q8C4D8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11541Q8C4D8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11541Q8C4D8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms