Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Eri3Q8C460 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Eri3Q8C460 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Eri3Q8C460 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Eri3Q8C460 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Eri3Q8C460 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Eri3Q8C460 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.08■■□□□ 1.13
Eri3Q8C460 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
Eri3Q8C460 Gm7432-201ENSMUST00000210343 879 ntBASIC22.07■■□□□ 1.12
Eri3Q8C460 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Eri3Q8C460 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Eri3Q8C460 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Eri3Q8C460 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Eri3Q8C460 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Eri3Q8C460 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Eri3Q8C460 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Eri3Q8C460 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Eri3Q8C460 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Eri3Q8C460 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Eri3Q8C460 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Eri3Q8C460 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Eri3Q8C460 Gm37136-201ENSMUST00000194368 194 ntBASIC22.03■■□□□ 1.12
Eri3Q8C460 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.03■■□□□ 1.12
Eri3Q8C460 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
Eri3Q8C460 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Eri3Q8C460 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Eri3Q8C460 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Eri3Q8C460 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Eri3Q8C460 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Eri3Q8C460 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Eri3Q8C460 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Eri3Q8C460 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.01■■□□□ 1.11
Eri3Q8C460 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Eri3Q8C460 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Eri3Q8C460 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Eri3Q8C460 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Eri3Q8C460 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Eri3Q8C460 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
Eri3Q8C460 Gm11599-201ENSMUST00000118720 878 ntBASIC21.98■■□□□ 1.11
Eri3Q8C460 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Eri3Q8C460 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Eri3Q8C460 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.98■■□□□ 1.11
Eri3Q8C460 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Eri3Q8C460 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Eri3Q8C460 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Eri3Q8C460 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Eri3Q8C460 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Eri3Q8C460 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Eri3Q8C460 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Eri3Q8C460 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Eri3Q8C460 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Eri3Q8C460 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Eri3Q8C460 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.94■■□□□ 1.1
Eri3Q8C460 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Eri3Q8C460 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.93■■□□□ 1.1
Eri3Q8C460 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Eri3Q8C460 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Eri3Q8C460 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Eri3Q8C460 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Eri3Q8C460 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Eri3Q8C460 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Eri3Q8C460 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Eri3Q8C460 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.91■■□□□ 1.1
Eri3Q8C460 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Eri3Q8C460 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Eri3Q8C460 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Eri3Q8C460 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Eri3Q8C460 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.89■■□□□ 1.09
Eri3Q8C460 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Eri3Q8C460 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Eri3Q8C460 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Eri3Q8C460 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.87■■□□□ 1.09
Eri3Q8C460 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Eri3Q8C460 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Eri3Q8C460 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Eri3Q8C460 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Eri3Q8C460 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Eri3Q8C460 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Eri3Q8C460 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Eri3Q8C460 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Eri3Q8C460 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Eri3Q8C460 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Eri3Q8C460 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Eri3Q8C460 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Eri3Q8C460 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Eri3Q8C460 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Eri3Q8C460 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Eri3Q8C460 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Eri3Q8C460 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Eri3Q8C460 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Eri3Q8C460 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Eri3Q8C460 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Eri3Q8C460 Gm4799-201ENSMUST00000095396 657 ntBASIC21.8■■□□□ 1.08
Eri3Q8C460 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Eri3Q8C460 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Eri3Q8C460 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Eri3Q8C460 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Eri3Q8C460 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Eri3Q8C460 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Eri3Q8C460 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms