Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsen54Q8C2A2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsen54Q8C2A2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.25■□□□□ 0.67
Tsen54Q8C2A2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsen54Q8C2A2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Tsen54Q8C2A2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsen54Q8C2A2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsen54Q8C2A2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsen54Q8C2A2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Tsen54Q8C2A2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsen54Q8C2A2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tsen54Q8C2A2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsen54Q8C2A2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsen54Q8C2A2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsen54Q8C2A2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsen54Q8C2A2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsen54Q8C2A2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tsen54Q8C2A2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsen54Q8C2A2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsen54Q8C2A2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tsen54Q8C2A2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsen54Q8C2A2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.22■□□□□ 0.67
Tsen54Q8C2A2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsen54Q8C2A2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.22■□□□□ 0.67
Tsen54Q8C2A2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tsen54Q8C2A2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsen54Q8C2A2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tsen54Q8C2A2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsen54Q8C2A2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsen54Q8C2A2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsen54Q8C2A2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.2■□□□□ 0.66
Tsen54Q8C2A2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsen54Q8C2A2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsen54Q8C2A2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tsen54Q8C2A2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tsen54Q8C2A2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tsen54Q8C2A2 Gm9397-201ENSMUST00000200125 605 ntBASIC19.19■□□□□ 0.66
Tsen54Q8C2A2 Gm45855-201ENSMUST00000212546 880 ntBASIC19.19■□□□□ 0.66
Tsen54Q8C2A2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsen54Q8C2A2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsen54Q8C2A2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tsen54Q8C2A2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Tsen54Q8C2A2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tsen54Q8C2A2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.18■□□□□ 0.66
Tsen54Q8C2A2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.18■□□□□ 0.66
Tsen54Q8C2A2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsen54Q8C2A2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsen54Q8C2A2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsen54Q8C2A2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tsen54Q8C2A2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Tsen54Q8C2A2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsen54Q8C2A2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tsen54Q8C2A2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsen54Q8C2A2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tsen54Q8C2A2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsen54Q8C2A2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.15■□□□□ 0.66
Tsen54Q8C2A2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tsen54Q8C2A2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tsen54Q8C2A2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tsen54Q8C2A2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tsen54Q8C2A2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tsen54Q8C2A2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tsen54Q8C2A2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tsen54Q8C2A2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tsen54Q8C2A2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tsen54Q8C2A2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.12■□□□□ 0.65
Tsen54Q8C2A2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tsen54Q8C2A2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Tsen54Q8C2A2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tsen54Q8C2A2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tsen54Q8C2A2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tsen54Q8C2A2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Tsen54Q8C2A2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tsen54Q8C2A2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tsen54Q8C2A2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tsen54Q8C2A2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tsen54Q8C2A2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.09■□□□□ 0.65
Tsen54Q8C2A2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tsen54Q8C2A2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tsen54Q8C2A2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tsen54Q8C2A2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tsen54Q8C2A2 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.08■□□□□ 0.64
Tsen54Q8C2A2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tsen54Q8C2A2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Tsen54Q8C2A2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tsen54Q8C2A2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tsen54Q8C2A2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Tsen54Q8C2A2 Gm24970-201ENSMUST00000175582 82 ntBASIC19.07■□□□□ 0.64
Tsen54Q8C2A2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tsen54Q8C2A2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tsen54Q8C2A2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Tsen54Q8C2A2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms