Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ppp4r4Q8C0Y0 Particl-201ENSMUST00000205370 1560 ntBASIC23.28■■□□□ 1.32
Ppp4r4Q8C0Y0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Ppp4r4Q8C0Y0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ppp4r4Q8C0Y0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.26■■□□□ 1.31
Ppp4r4Q8C0Y0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.26■■□□□ 1.31
Ppp4r4Q8C0Y0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.26■■□□□ 1.31
Ppp4r4Q8C0Y0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ppp4r4Q8C0Y0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ppp4r4Q8C0Y0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
Ppp4r4Q8C0Y0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ppp4r4Q8C0Y0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Ppp4r4Q8C0Y0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.24■■□□□ 1.31
Ppp4r4Q8C0Y0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.24■■□□□ 1.31
Ppp4r4Q8C0Y0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ppp4r4Q8C0Y0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ppp4r4Q8C0Y0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ppp4r4Q8C0Y0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp4r4Q8C0Y0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp4r4Q8C0Y0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp4r4Q8C0Y0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp4r4Q8C0Y0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ppp4r4Q8C0Y0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.21■■□□□ 1.31
Ppp4r4Q8C0Y0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ppp4r4Q8C0Y0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.2■■□□□ 1.3
Ppp4r4Q8C0Y0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ppp4r4Q8C0Y0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ppp4r4Q8C0Y0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Ppp4r4Q8C0Y0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.2■■□□□ 1.3
Ppp4r4Q8C0Y0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ppp4r4Q8C0Y0 Gm11599-201ENSMUST00000118720 878 ntBASIC23.19■■□□□ 1.3
Ppp4r4Q8C0Y0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.19■■□□□ 1.3
Ppp4r4Q8C0Y0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ppp4r4Q8C0Y0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.19■■□□□ 1.3
Ppp4r4Q8C0Y0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.19■■□□□ 1.3
Ppp4r4Q8C0Y0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ppp4r4Q8C0Y0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ppp4r4Q8C0Y0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ppp4r4Q8C0Y0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ppp4r4Q8C0Y0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ppp4r4Q8C0Y0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ppp4r4Q8C0Y0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ppp4r4Q8C0Y0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ppp4r4Q8C0Y0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
Ppp4r4Q8C0Y0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ppp4r4Q8C0Y0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r4Q8C0Y0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r4Q8C0Y0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r4Q8C0Y0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r4Q8C0Y0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r4Q8C0Y0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ppp4r4Q8C0Y0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ppp4r4Q8C0Y0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ppp4r4Q8C0Y0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ppp4r4Q8C0Y0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ppp4r4Q8C0Y0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp4r4Q8C0Y0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp4r4Q8C0Y0 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.13■■□□□ 1.29
Ppp4r4Q8C0Y0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp4r4Q8C0Y0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp4r4Q8C0Y0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ppp4r4Q8C0Y0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Ppp4r4Q8C0Y0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ppp4r4Q8C0Y0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ppp4r4Q8C0Y0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ppp4r4Q8C0Y0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ppp4r4Q8C0Y0 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.11■■□□□ 1.29
Ppp4r4Q8C0Y0 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.11■■□□□ 1.29
Ppp4r4Q8C0Y0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ppp4r4Q8C0Y0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ppp4r4Q8C0Y0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ppp4r4Q8C0Y0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ppp4r4Q8C0Y0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ppp4r4Q8C0Y0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ppp4r4Q8C0Y0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ppp4r4Q8C0Y0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ppp4r4Q8C0Y0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.08■■□□□ 1.29
Ppp4r4Q8C0Y0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ppp4r4Q8C0Y0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ppp4r4Q8C0Y0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ppp4r4Q8C0Y0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Ppp4r4Q8C0Y0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ppp4r4Q8C0Y0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp4r4Q8C0Y0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp4r4Q8C0Y0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp4r4Q8C0Y0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp4r4Q8C0Y0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp4r4Q8C0Y0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp4r4Q8C0Y0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
Ppp4r4Q8C0Y0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp4r4Q8C0Y0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp4r4Q8C0Y0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp4r4Q8C0Y0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp4r4Q8C0Y0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp4r4Q8C0Y0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp4r4Q8C0Y0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp4r4Q8C0Y0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
Ppp4r4Q8C0Y0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ppp4r4Q8C0Y0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.01■■□□□ 1.27
Ppp4r4Q8C0Y0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms