Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Suds3Q8BR65 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.58■■□□□ 1.37
Suds3Q8BR65 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
Suds3Q8BR65 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Suds3Q8BR65 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Suds3Q8BR65 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.58■■□□□ 1.37
Suds3Q8BR65 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Suds3Q8BR65 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Suds3Q8BR65 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.58■■□□□ 1.36
Suds3Q8BR65 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Suds3Q8BR65 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Suds3Q8BR65 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Suds3Q8BR65 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Suds3Q8BR65 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Suds3Q8BR65 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Suds3Q8BR65 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Suds3Q8BR65 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Suds3Q8BR65 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Suds3Q8BR65 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Suds3Q8BR65 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Suds3Q8BR65 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Suds3Q8BR65 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Suds3Q8BR65 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Suds3Q8BR65 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Suds3Q8BR65 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
Suds3Q8BR65 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Suds3Q8BR65 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Suds3Q8BR65 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Suds3Q8BR65 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
Suds3Q8BR65 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Suds3Q8BR65 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Suds3Q8BR65 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Suds3Q8BR65 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Suds3Q8BR65 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Suds3Q8BR65 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.52■■□□□ 1.36
Suds3Q8BR65 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Suds3Q8BR65 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.51■■□□□ 1.35
Suds3Q8BR65 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Suds3Q8BR65 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
Suds3Q8BR65 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.5■■□□□ 1.35
Suds3Q8BR65 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.5■■□□□ 1.35
Suds3Q8BR65 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Suds3Q8BR65 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.49■■□□□ 1.35
Suds3Q8BR65 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Suds3Q8BR65 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Suds3Q8BR65 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Suds3Q8BR65 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Suds3Q8BR65 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Suds3Q8BR65 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Suds3Q8BR65 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Suds3Q8BR65 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Suds3Q8BR65 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Suds3Q8BR65 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Suds3Q8BR65 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.47■■□□□ 1.35
Suds3Q8BR65 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Suds3Q8BR65 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Suds3Q8BR65 Gm7432-201ENSMUST00000210343 879 ntBASIC23.46■■□□□ 1.35
Suds3Q8BR65 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Suds3Q8BR65 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Suds3Q8BR65 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Suds3Q8BR65 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Suds3Q8BR65 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Suds3Q8BR65 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Suds3Q8BR65 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Suds3Q8BR65 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Suds3Q8BR65 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Suds3Q8BR65 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Suds3Q8BR65 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Suds3Q8BR65 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Suds3Q8BR65 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Suds3Q8BR65 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.43■■□□□ 1.34
Suds3Q8BR65 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Suds3Q8BR65 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Suds3Q8BR65 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Suds3Q8BR65 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.41■■□□□ 1.34
Suds3Q8BR65 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Suds3Q8BR65 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Suds3Q8BR65 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Suds3Q8BR65 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Suds3Q8BR65 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Suds3Q8BR65 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Suds3Q8BR65 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Suds3Q8BR65 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.38■■□□□ 1.33
Suds3Q8BR65 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Suds3Q8BR65 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Suds3Q8BR65 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Suds3Q8BR65 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Suds3Q8BR65 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Suds3Q8BR65 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Suds3Q8BR65 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Suds3Q8BR65 Gm11599-201ENSMUST00000118720 878 ntBASIC23.35■■□□□ 1.33
Suds3Q8BR65 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.35■■□□□ 1.33
Suds3Q8BR65 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.34■■□□□ 1.33
Suds3Q8BR65 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
Suds3Q8BR65 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.33■■□□□ 1.33
Suds3Q8BR65 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Suds3Q8BR65 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Suds3Q8BR65 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Suds3Q8BR65 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Suds3Q8BR65 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms