Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Npas1P97459 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Npas1P97459 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npas1P97459 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Npas1P97459 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npas1P97459 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npas1P97459 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.35■□□□□ 0.69
Npas1P97459 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npas1P97459 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Npas1P97459 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npas1P97459 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npas1P97459 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npas1P97459 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.34■□□□□ 0.69
Npas1P97459 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npas1P97459 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npas1P97459 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Npas1P97459 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npas1P97459 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npas1P97459 Gm24804-201ENSMUST00000174982 85 ntBASIC19.32■□□□□ 0.68
Npas1P97459 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Npas1P97459 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npas1P97459 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.31■□□□□ 0.68
Npas1P97459 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.31■□□□□ 0.68
Npas1P97459 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Npas1P97459 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npas1P97459 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.31■□□□□ 0.68
Npas1P97459 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Npas1P97459 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npas1P97459 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npas1P97459 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Npas1P97459 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npas1P97459 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npas1P97459 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.3■□□□□ 0.68
Npas1P97459 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npas1P97459 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npas1P97459 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npas1P97459 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npas1P97459 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Npas1P97459 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Npas1P97459 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npas1P97459 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Npas1P97459 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Npas1P97459 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.28■□□□□ 0.68
Npas1P97459 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npas1P97459 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npas1P97459 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Npas1P97459 Gm16148-201ENSMUST00000119653 893 ntBASIC19.26■□□□□ 0.67
Npas1P97459 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npas1P97459 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npas1P97459 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npas1P97459 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Npas1P97459 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npas1P97459 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Npas1P97459 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Npas1P97459 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas1P97459 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Npas1P97459 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Npas1P97459 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Npas1P97459 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas1P97459 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Npas1P97459 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.22■□□□□ 0.67
Npas1P97459 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Npas1P97459 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Npas1P97459 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Npas1P97459 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npas1P97459 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npas1P97459 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas1P97459 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas1P97459 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas1P97459 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas1P97459 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npas1P97459 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npas1P97459 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Npas1P97459 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npas1P97459 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas1P97459 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas1P97459 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Npas1P97459 Notumos-201ENSMUST00000151998 2659 ntBASIC19.18■□□□□ 0.66
Npas1P97459 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npas1P97459 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npas1P97459 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npas1P97459 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas1P97459 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas1P97459 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.17■□□□□ 0.66
Npas1P97459 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas1P97459 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npas1P97459 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Npas1P97459 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas1P97459 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npas1P97459 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas1P97459 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas1P97459 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas1P97459 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas1P97459 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas1P97459 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npas1P97459 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npas1P97459 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Npas1P97459 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npas1P97459 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npas1P97459 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms