Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col8a2P25318 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col8a2P25318 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col8a2P25318 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.56■□□□□ 0.72
Col8a2P25318 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col8a2P25318 Gm6311-201ENSMUST00000073790 878 ntBASIC19.54■□□□□ 0.72
Col8a2P25318 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col8a2P25318 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col8a2P25318 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Col8a2P25318 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.53■□□□□ 0.72
Col8a2P25318 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.53■□□□□ 0.72
Col8a2P25318 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.53■□□□□ 0.72
Col8a2P25318 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col8a2P25318 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col8a2P25318 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col8a2P25318 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col8a2P25318 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col8a2P25318 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Col8a2P25318 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Col8a2P25318 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col8a2P25318 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Col8a2P25318 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col8a2P25318 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Col8a2P25318 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col8a2P25318 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col8a2P25318 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col8a2P25318 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col8a2P25318 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col8a2P25318 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col8a2P25318 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.5■□□□□ 0.71
Col8a2P25318 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col8a2P25318 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.5■□□□□ 0.71
Col8a2P25318 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col8a2P25318 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col8a2P25318 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Col8a2P25318 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col8a2P25318 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col8a2P25318 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col8a2P25318 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Col8a2P25318 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.48■□□□□ 0.71
Col8a2P25318 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col8a2P25318 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col8a2P25318 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Col8a2P25318 Gm4799-201ENSMUST00000095396 657 ntBASIC19.47■□□□□ 0.71
Col8a2P25318 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col8a2P25318 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col8a2P25318 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.45■□□□□ 0.7
Col8a2P25318 Gm45364-201ENSMUST00000210883 159 ntBASIC19.45■□□□□ 0.7
Col8a2P25318 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col8a2P25318 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col8a2P25318 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col8a2P25318 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.44■□□□□ 0.7
Col8a2P25318 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col8a2P25318 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.44■□□□□ 0.7
Col8a2P25318 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col8a2P25318 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Col8a2P25318 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col8a2P25318 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.44■□□□□ 0.7
Col8a2P25318 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col8a2P25318 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.44■□□□□ 0.7
Col8a2P25318 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col8a2P25318 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col8a2P25318 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col8a2P25318 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col8a2P25318 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.42■□□□□ 0.7
Col8a2P25318 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col8a2P25318 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col8a2P25318 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col8a2P25318 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col8a2P25318 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col8a2P25318 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col8a2P25318 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col8a2P25318 Mir3960-201ENSMUST00000198213 73 ntBASIC19.38■□□□□ 0.69
Col8a2P25318 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col8a2P25318 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col8a2P25318 Scarna2-201ENSMUST00000157560 414 ntBASIC19.37■□□□□ 0.69
Col8a2P25318 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.37■□□□□ 0.69
Col8a2P25318 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col8a2P25318 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col8a2P25318 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col8a2P25318 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.36■□□□□ 0.69
Col8a2P25318 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col8a2P25318 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col8a2P25318 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.35■□□□□ 0.69
Col8a2P25318 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col8a2P25318 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.35■□□□□ 0.69
Col8a2P25318 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col8a2P25318 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Col8a2P25318 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col8a2P25318 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col8a2P25318 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col8a2P25318 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col8a2P25318 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col8a2P25318 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col8a2P25318 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col8a2P25318 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.33■□□□□ 0.68
Col8a2P25318 Gm16437-201ENSMUST00000025669 507 ntBASIC19.33■□□□□ 0.68
Col8a2P25318 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Col8a2P25318 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.32■□□□□ 0.68
Col8a2P25318 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms