Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16,29■□□□□ 0,2
Sh2d1aO88890 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16,29■□□□□ 0,2
Sh2d1aO88890 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16,29■□□□□ 0,2
Sh2d1aO88890 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16,29■□□□□ 0,2
Sh2d1aO88890 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16,29■□□□□ 0,2
Sh2d1aO88890 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16,28■□□□□ 0,2
Sh2d1aO88890 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16,28■□□□□ 0,2
Sh2d1aO88890 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16,28■□□□□ 0,2
Sh2d1aO88890 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16,28■□□□□ 0,2
Sh2d1aO88890 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16,27■□□□□ 0,2
Sh2d1aO88890 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16,27■□□□□ 0,2
Sh2d1aO88890 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16,27■□□□□ 0,2
Sh2d1aO88890 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16,27■□□□□ 0,2
Sh2d1aO88890 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16,27■□□□□ 0,2
Sh2d1aO88890 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16,26■□□□□ 0,19
Sh2d1aO88890 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16,25■□□□□ 0,19
Sh2d1aO88890 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16,25■□□□□ 0,19
Sh2d1aO88890 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16,25■□□□□ 0,19
Sh2d1aO88890 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16,25■□□□□ 0,19
Sh2d1aO88890 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16,25■□□□□ 0,19
Sh2d1aO88890 Nkain2-201ENSMUST00000092602 558 ntBASIC16,25■□□□□ 0,19
Sh2d1aO88890 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16,25■□□□□ 0,19
Sh2d1aO88890 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16,25■□□□□ 0,19
Sh2d1aO88890 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Sh2d1aO88890 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16,23■□□□□ 0,19
Sh2d1aO88890 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16,23■□□□□ 0,19
Sh2d1aO88890 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16,23■□□□□ 0,19
Sh2d1aO88890 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16,22■□□□□ 0,19
Sh2d1aO88890 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16,22■□□□□ 0,19
Sh2d1aO88890 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16,22■□□□□ 0,19
Sh2d1aO88890 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16,22■□□□□ 0,19
Sh2d1aO88890 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16,21■□□□□ 0,19
Sh2d1aO88890 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16,21■□□□□ 0,19
Sh2d1aO88890 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16,21■□□□□ 0,19
Sh2d1aO88890 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16,21■□□□□ 0,19
Sh2d1aO88890 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16,21■□□□□ 0,19
Sh2d1aO88890 Gm9939-201ENSMUST00000067161 1154 ntBASIC16,21■□□□□ 0,19
Sh2d1aO88890 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16,21■□□□□ 0,19
Sh2d1aO88890 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16,21■□□□□ 0,18
Sh2d1aO88890 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16,2■□□□□ 0,18
Sh2d1aO88890 Gm42809-201ENSMUST00000198429 1138 ntBASIC16,2■□□□□ 0,18
Sh2d1aO88890 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16,2■□□□□ 0,18
Sh2d1aO88890 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16,2■□□□□ 0,18
Sh2d1aO88890 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16,2■□□□□ 0,18
Sh2d1aO88890 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16,19■□□□□ 0,18
Sh2d1aO88890 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16,19■□□□□ 0,18
Sh2d1aO88890 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16,19■□□□□ 0,18
Sh2d1aO88890 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16,19■□□□□ 0,18
Sh2d1aO88890 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16,19■□□□□ 0,18
Sh2d1aO88890 Gm37847-201ENSMUST00000192163 1497 ntBASIC16,19■□□□□ 0,18
Sh2d1aO88890 Gm31748-201ENSMUST00000194938 1497 ntBASIC16,19■□□□□ 0,18
Sh2d1aO88890 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16,19■□□□□ 0,18
Sh2d1aO88890 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16,18■□□□□ 0,18
Sh2d1aO88890 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16,18■□□□□ 0,18
Sh2d1aO88890 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16,18■□□□□ 0,18
Sh2d1aO88890 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16,18■□□□□ 0,18
Sh2d1aO88890 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16,18■□□□□ 0,18
Sh2d1aO88890 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16,17■□□□□ 0,18
Sh2d1aO88890 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16,17■□□□□ 0,18
Sh2d1aO88890 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16,17■□□□□ 0,18
Sh2d1aO88890 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16,16■□□□□ 0,18
Sh2d1aO88890 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16,16■□□□□ 0,18
Sh2d1aO88890 Gm6821-201ENSMUST00000107540 542 ntBASIC16,16■□□□□ 0,18
Sh2d1aO88890 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16,15■□□□□ 0,18
Sh2d1aO88890 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16,15■□□□□ 0,18
Sh2d1aO88890 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16,14■□□□□ 0,18
Sh2d1aO88890 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16,14■□□□□ 0,17
Sh2d1aO88890 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16,14■□□□□ 0,17
Sh2d1aO88890 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16,14■□□□□ 0,17
Sh2d1aO88890 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16,14■□□□□ 0,17
Sh2d1aO88890 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16,14■□□□□ 0,17
Sh2d1aO88890 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16,14■□□□□ 0,17
Sh2d1aO88890 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16,13■□□□□ 0,17
Sh2d1aO88890 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16,13■□□□□ 0,17
Sh2d1aO88890 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16,13■□□□□ 0,17
Sh2d1aO88890 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16,13■□□□□ 0,17
Sh2d1aO88890 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16,13■□□□□ 0,17
Sh2d1aO88890 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16,12■□□□□ 0,17
Sh2d1aO88890 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16,12■□□□□ 0,17
Sh2d1aO88890 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16,12■□□□□ 0,17
Sh2d1aO88890 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16,12■□□□□ 0,17
Sh2d1aO88890 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16,12■□□□□ 0,17
Sh2d1aO88890 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16,12■□□□□ 0,17
Sh2d1aO88890 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16,11■□□□□ 0,17
Sh2d1aO88890 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16,11■□□□□ 0,17
Sh2d1aO88890 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16,1■□□□□ 0,17
Sh2d1aO88890 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16,1■□□□□ 0,17
Sh2d1aO88890 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16,1■□□□□ 0,17
Sh2d1aO88890 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16,1■□□□□ 0,17
Sh2d1aO88890 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16,1■□□□□ 0,17
Sh2d1aO88890 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16,1■□□□□ 0,17
Sh2d1aO88890 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16,1■□□□□ 0,17
Retrieved 100 of 76,532 protein–RNA pairs in 28,8 ms