Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC33.5■■■□□ 2.95
Zc3h13E9Q784 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
Zc3h13E9Q784 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Zc3h13E9Q784 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Zc3h13E9Q784 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Zc3h13E9Q784 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Zc3h13E9Q784 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC33.48■■■□□ 2.95
Zc3h13E9Q784 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Zc3h13E9Q784 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC33.47■■■□□ 2.95
Zc3h13E9Q784 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Zc3h13E9Q784 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Zc3h13E9Q784 Gm5067-201ENSMUST00000170449 1009 ntBASIC33.45■■■□□ 2.95
Zc3h13E9Q784 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC33.45■■■□□ 2.95
Zc3h13E9Q784 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Zc3h13E9Q784 AC122317.2-201ENSMUST00000218708 1248 ntBASIC33.45■■■□□ 2.94
Zc3h13E9Q784 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Zc3h13E9Q784 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Zc3h13E9Q784 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Zc3h13E9Q784 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Zc3h13E9Q784 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC33.42■■■□□ 2.94
Zc3h13E9Q784 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Zc3h13E9Q784 Gm15546-201ENSMUST00000122095 826 ntBASIC33.41■■■□□ 2.94
Zc3h13E9Q784 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Zc3h13E9Q784 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Zc3h13E9Q784 Gm12818-201ENSMUST00000117562 1349 ntBASIC33.41■■■□□ 2.94
Zc3h13E9Q784 Gm13889-201ENSMUST00000099689 1386 ntBASIC33.41■■■□□ 2.94
Zc3h13E9Q784 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Zc3h13E9Q784 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Zc3h13E9Q784 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
Zc3h13E9Q784 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Zc3h13E9Q784 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Zc3h13E9Q784 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC33.38■■■□□ 2.93
Zc3h13E9Q784 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC33.38■■■□□ 2.93
Zc3h13E9Q784 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC33.38■■■□□ 2.93
Zc3h13E9Q784 AC151971.4-201ENSMUST00000214717 704 ntBASIC33.38■■■□□ 2.93
Zc3h13E9Q784 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Zc3h13E9Q784 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC33.37■■■□□ 2.93
Zc3h13E9Q784 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC33.37■■■□□ 2.93
Zc3h13E9Q784 Gm10420-201ENSMUST00000121713 882 ntBASIC33.36■■■□□ 2.93
Zc3h13E9Q784 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Zc3h13E9Q784 Gm5522-201ENSMUST00000189483 1242 ntBASIC33.36■■■□□ 2.93
Zc3h13E9Q784 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Zc3h13E9Q784 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Zc3h13E9Q784 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC33.34■■■□□ 2.93
Zc3h13E9Q784 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Zc3h13E9Q784 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Zc3h13E9Q784 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Zc3h13E9Q784 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC33.32■■■□□ 2.92
Zc3h13E9Q784 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC33.31■■■□□ 2.92
Zc3h13E9Q784 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Zc3h13E9Q784 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Zc3h13E9Q784 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC33.29■■■□□ 2.92
Zc3h13E9Q784 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Zc3h13E9Q784 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Zc3h13E9Q784 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Zc3h13E9Q784 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Zc3h13E9Q784 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.27■■■□□ 2.92
Zc3h13E9Q784 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
Zc3h13E9Q784 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC33.26■■■□□ 2.92
Zc3h13E9Q784 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Zc3h13E9Q784 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Zc3h13E9Q784 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Zc3h13E9Q784 Gm9910-201ENSMUST00000195385 1550 ntBASIC33.24■■■□□ 2.91
Zc3h13E9Q784 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC33.24■■■□□ 2.91
Zc3h13E9Q784 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC33.24■■■□□ 2.91
Zc3h13E9Q784 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Zc3h13E9Q784 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Zc3h13E9Q784 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Zc3h13E9Q784 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Zc3h13E9Q784 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC33.22■■■□□ 2.91
Zc3h13E9Q784 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
Zc3h13E9Q784 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
Zc3h13E9Q784 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Zc3h13E9Q784 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC33.2■■■□□ 2.91
Zc3h13E9Q784 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Zc3h13E9Q784 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Zc3h13E9Q784 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Zc3h13E9Q784 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Zc3h13E9Q784 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC33.18■■■□□ 2.9
Zc3h13E9Q784 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Zc3h13E9Q784 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Zc3h13E9Q784 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Zc3h13E9Q784 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Zc3h13E9Q784 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Zc3h13E9Q784 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
Zc3h13E9Q784 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Zc3h13E9Q784 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Zc3h13E9Q784 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
Zc3h13E9Q784 Gm9812-201ENSMUST00000061934 968 ntBASIC33.13■■■□□ 2.89
Zc3h13E9Q784 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
Zc3h13E9Q784 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC33.12■■■□□ 2.89
Zc3h13E9Q784 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Zc3h13E9Q784 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Zc3h13E9Q784 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
Zc3h13E9Q784 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Zc3h13E9Q784 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC33.11■■■□□ 2.89
Zc3h13E9Q784 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC33.11■■■□□ 2.89
Zc3h13E9Q784 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC33.11■■■□□ 2.89
Zc3h13E9Q784 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
Zc3h13E9Q784 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms