Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SNORD116-11-201ENST00000383882 92 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 RNU6-328P-201ENST00000390887 106 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC009302.1-201ENST00000417147 390 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AL590609.2-201ENST00000421430 368 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 HMGN2P27-201ENST00000427352 270 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 CALM2P2-201ENST00000428512 440 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 RPL35AP22-201ENST00000436855 335 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 MTCO3P10-201ENST00000455912 772 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 RNA5SP249-201ENST00000516127 99 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 RNA5SP49-201ENST00000516450 115 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 FAM60DP-201ENST00000524174 632 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AL359219.2-201ENST00000555184 348 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC124068.1-201ENST00000563131 678 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC123786.2-201ENST00000603459 275 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC012443.1-201ENST00000605605 231 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 TPTE2P4-201ENST00000258589 1605 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 AC104623.2-202ENST00000623477 4002 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.63□□□□□ -1.67
HCFC2Q9Y5Z7 MTND4P1-201ENST00000457501 1466 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 Y_RNA.149-201ENST00000363558 117 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 MIR670-201ENST00000390142 98 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 MRPL42P3-201ENST00000401492 326 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 MIR1302-3-201ENST00000408128 138 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 RNU2-36P-201ENST00000410361 191 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 RN7SKP58-201ENST00000411010 305 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 MCFD2P1-201ENST00000417812 300 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 MTCYBP10-201ENST00000424905 650 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 RPL7P46-201ENST00000425129 740 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 SNAP23P1-201ENST00000433229 246 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC127537.2-201ENST00000439258 465 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC005094.1-201ENST00000440420 368 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC243772.1-201ENST00000451620 410 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 RPL30P15-201ENST00000457129 321 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 RNU1-45P-201ENST00000517191 141 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC023442.1-201ENST00000531247 422 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC135001.1-201ENST00000544546 283 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC015912.2-201ENST00000571053 181 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 MIR4286-201ENST00000580651 93 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 MIR5583-1-201ENST00000580941 59 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC012409.4-201ENST00000612923 249 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AL442067.1-201ENST00000613261 223 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 Z69720.2-201ENST00000624755 279 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC139769.1-204ENST00000472297 1931 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 AC009229.4-201ENST00000623854 1947 ntBASIC4.62□□□□□ -1.67
HCFC2Q9Y5Z7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 AC092376.2-201ENST00000622621 4116 ntBASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 AL137003.2-201ENST00000606924 2538 ntBASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 Y_RNA.252-201ENST00000364556 101 ntBASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 RNA5SP513-201ENST00000364648 118 ntBASIC4.61□□□□□ -1.67
HCFC2Q9Y5Z7 SNORA62.3-201ENST00000365110 153 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms