Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU6-817P-201ENST00000391083 104 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 UBE2D3P2-201ENST00000424409 445 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 OR2B8P-201ENST00000432841 938 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 SNRPEP4-201ENST00000435815 279 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC069285.2-201ENST00000440210 275 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 RPS4XP4-201ENST00000443195 763 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 MTATP6P30-201ENST00000443540 664 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC087588.1-201ENST00000462203 316 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 RN7SL271P-201ENST00000487601 295 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 IGKV2-38-201ENST00000517443 247 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 OR5G4P-201ENST00000525251 760 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 OR4R1P-201ENST00000529879 463 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC106785.1-201ENST00000565935 262 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC025627.2-201ENST00000576220 160 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC174048.1-201ENST00000603389 144 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC104763.2-201ENST00000604179 382 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 SNORD6-201ENST00000365444 73 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 RNA5SP306-201ENST00000411087 107 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 ZNF885P-201ENST00000420174 1098 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 OR5BE1P-201ENST00000425977 939 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 TIMM9P3-201ENST00000428659 274 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 PSPHP1-201ENST00000450062 261 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AC023598.1-201ENST00000472521 361 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AC126389.1-201ENST00000477436 290 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AC026427.2-201ENST00000506228 536 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 SAP18P1-201ENST00000512058 390 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 RNU6-506P-201ENST00000516553 94 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 FAM92A1P1-201ENST00000528023 890 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 MIR4286-201ENST00000580651 93 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AC067852.3-201ENST00000589177 561 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AL139395.1-201ENST00000603662 160 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 DPPA3P3-201ENST00000603842 430 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 Z84480.1-201ENST00000605131 311 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 AC009570.1-201ENST00000609599 745 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 MIR6875-201ENST00000617506 72 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 OR5BE1P-202ENST00000641168 1176 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 OTUD4P1-201ENST00000237841 3067 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 BDP1P-201ENST00000582658 1990 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 FAM35BP-202ENST00000497389 3337 ntBASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL4A3BPQ9Y5P4 TPTE2P4-201ENST00000258589 1605 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 Y_RNA.22-201ENST00000362492 102 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 Y_RNA.41-201ENST00000362646 102 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 SNORA3C-201ENST00000408792 125 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 RNU4-6P-201ENST00000410804 122 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 MTATP6P18-201ENST00000417994 673 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 AC004552.1-201ENST00000419089 348 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 RPL23AP30-201ENST00000432419 501 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 RNA5SP310-201ENST00000459084 116 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 RPS26P3-201ENST00000470205 348 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 AC090543.2-201ENST00000483963 348 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 AC004057.1-201ENST00000485827 348 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 SNORA31.3-201ENST00000516029 96 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 RNU6-677P-201ENST00000516914 101 ntBASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A3BPQ9Y5P4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms