Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 AL133162.1-201ENST00000463228 453 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 AL049714.1-201ENST00000466686 347 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 RPS3AP14-201ENST00000483907 780 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 AC114797.1-201ENST00000514003 728 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 MTCYBP41-201ENST00000528913 1123 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP3Q9Y446 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 SUB1P2-201ENST00000556401 297 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 AL020997.2-201ENST00000602607 184 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 AC068944.2-201ENST00000610373 403 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 MIR6798-201ENST00000612887 67 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PKP3Q9Y446 AC015967.1-201ENST00000619893 476 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 AL359880.1-201ENST00000621879 266 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 AP000553.6-201ENST00000641242 118 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PKP3Q9Y446 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.72□□□□□ -1.81
PKP3Q9Y446 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PKP3Q9Y446 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PKP3Q9Y446 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PKP3Q9Y446 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP3Q9Y446 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP3Q9Y446 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PKP3Q9Y446 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 RNU1-64P-201ENST00000365443 163 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 AL445189.1-201ENST00000405722 338 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 RPS3AP24-201ENST00000407896 734 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 RN7SKP159-201ENST00000410657 292 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 UBE2FP1-201ENST00000416536 447 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 TIMM9P3-201ENST00000428659 274 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC004866.2-201ENST00000438285 481 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC023598.1-201ENST00000472521 361 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 RPS15AP36-201ENST00000492022 382 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC068305.1-201ENST00000497406 726 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC011352.1-201ENST00000512300 793 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 RNU6-64P-201ENST00000517119 105 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 AP001893.2-201ENST00000526949 202 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PKP3Q9Y446 CCNG2P1-201ENST00000549521 1000 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC125611.2-201ENST00000551907 647 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC012182.1-201ENST00000570133 895 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AL022099.1-201ENST00000604551 712 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 RBM11P1-201ENST00000604951 799 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AL136363.1-201ENST00000605349 337 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC090517.2-201ENST00000614966 680 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AL450472.3-201ENST00000615578 367 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AC243312.2-201ENST00000623340 601 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AL136313.1-201ENST00000624804 202 ntBASIC3.71□□□□□ -1.82
PKP3Q9Y446 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PKP3Q9Y446 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.71□□□□□ -1.82
PKP3Q9Y446 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKP3Q9Y446 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.7□□□□□ -1.82
PKP3Q9Y446 ELF2P3-201ENST00000445099 1506 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PKP3Q9Y446 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKP3Q9Y446 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKP3Q9Y446 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PKP3Q9Y446 RNU5E-8P-201ENST00000363502 116 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 U3.11-201ENST00000364476 212 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 RNU6-169P-201ENST00000365336 107 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 RNU6-456P-201ENST00000384493 107 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 Y_RNA.554-201ENST00000384672 102 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKP3Q9Y446 RNA5SP107-201ENST00000411358 122 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.7□□□□□ -1.82
PKP3Q9Y446 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.7□□□□□ -1.82
PKP3Q9Y446 AL138799.3-201ENST00000438968 350 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 AC005094.1-201ENST00000440420 368 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.7□□□□□ -1.82
PKP3Q9Y446 AL162389.1-201ENST00000449233 177 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.7□□□□□ -1.82
PKP3Q9Y446 AC010285.1-201ENST00000470580 392 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 AC079382.1-201ENST00000493346 557 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PKP3Q9Y446 HMGN1P11-201ENST00000508668 303 ntBASIC3.7□□□□□ -1.82
PKP3Q9Y446 RN7SKP83-201ENST00000516512 178 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms