Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CR848007.1-201ENST00000442354 1699 ntBASIC1.16□□□□□ -2.22
UBE2D4Q9Y2X8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 U3.20-201ENST00000390909 217 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 RNU6-1140P-201ENST00000410517 106 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 POLHP1-201ENST00000411806 470 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 AC009237.2-201ENST00000421358 284 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 MTCYBP29-201ENST00000436327 1006 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 MRPL35P4-201ENST00000453682 566 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 snoU13.3-201ENST00000459441 104 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 HSBP1P1-201ENST00000555205 166 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 AC013444.2-201ENST00000603317 787 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 AL450336.1-201ENST00000605180 586 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 AC068944.2-201ENST00000610373 403 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 AC022031.1-201ENST00000585985 2593 ntBASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
UBE2D4Q9Y2X8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 RNU1-105P-201ENST00000363470 161 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 MIR1261-201ENST00000408659 82 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 MTCO3P12-201ENST00000416718 547 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 WASF1P1-201ENST00000447560 1131 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AL627224.1-201ENST00000448334 444 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 HMGN1P8-201ENST00000463578 288 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC072039.1-201ENST00000477611 581 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC068587.2-201ENST00000478386 781 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 RN7SL429P-201ENST00000479090 223 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 RN7SL489P-201ENST00000486185 223 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 RN7SL327P-201ENST00000488659 223 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 YWHAEP4-201ENST00000505390 198 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC084851.1-201ENST00000529105 249 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 YWHAZP1-201ENST00000556286 722 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 UBE2L4-201ENST00000587688 464 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC078899.2-201ENST00000595282 212 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC126118.1-201ENST00000607744 628 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC093673.2-201ENST00000609674 331 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 RN7SL853P-201ENST00000617250 223 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AL449363.1-201ENST00000617815 186 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC073592.7-201ENST00000623659 507 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AL049737.1-201ENST00000413920 1403 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 AC004520.1-201ENST00000608362 1413 ntBASIC1.14□□□□□ -2.23
UBE2D4Q9Y2X8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 OR4G2P-202ENST00000641004 1759 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 MCTS2P-201ENST00000394552 546 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 SNORA81-201ENST00000408493 178 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 RN7SKP101-201ENST00000411376 320 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 SEPT2P1-201ENST00000419651 180 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 RPL7P54-201ENST00000438336 674 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AL360221.1-201ENST00000445989 335 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC005297.2-201ENST00000450430 606 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 snoU13.26-201ENST00000459452 105 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AL121769.1-201ENST00000469473 401 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 UBL5P3-201ENST00000475112 231 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC133963.2-201ENST00000513686 578 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 ATP5F1P5-201ENST00000526403 760 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 EIF4EP5-201ENST00000528228 640 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AL009028.1-201ENST00000604895 802 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AP005137.2-201ENST00000609238 400 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 uc_338.5-201ENST00000611839 155 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC079395.3-201ENST00000615161 484 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 AC026634.1-201ENST00000634369 198 ntBASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
UBE2D4Q9Y2X8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms