Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CR381653.2-201ENST00000624041 768 ntBASIC2.55□□□□□ -2
TRAPPC4Q9Y296 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.55□□□□□ -2
TRAPPC4Q9Y296 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRAPPC4Q9Y296 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 SGO1P2-201ENST00000429458 1589 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC005539.1-201ENST00000443768 1479 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC011477.1-204ENST00000623416 1325 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 DEFA7P-201ENST00000382676 285 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 SNORA48.2-201ENST00000390926 124 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 ANAPC10P1-201ENST00000395991 556 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 RNU2-47P-201ENST00000410649 186 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 SSXP9-201ENST00000417503 292 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 HMGB1P49-201ENST00000418882 569 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AL645937.1-202ENST00000421799 937 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AL513043.1-201ENST00000439124 535 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 FGF7P5-201ENST00000441829 291 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 SNORA31.8-201ENST00000516327 108 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 DUXAP4-201ENST00000603046 613 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC004987.4-201ENST00000603383 338 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC105148.1-201ENST00000604961 409 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AL592221.1-201ENST00000605266 382 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC112220.3-201ENST00000605502 502 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC006270.3-201ENST00000605967 1036 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC092106.3-201ENST00000611308 722 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC135507.2-201ENST00000612443 309 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC095031.1-201ENST00000623685 672 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC068787.1-201ENST00000623908 691 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
TRAPPC4Q9Y296 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRAPPC4Q9Y296 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC233263.6-201ENST00000631132 1963 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 RNU6-28P-201ENST00000362378 107 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AL136372.1-201ENST00000403060 228 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 RNA5SP38-201ENST00000410750 119 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 RPS15AP38-201ENST00000413110 372 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 RPL21P32-201ENST00000419877 477 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 MTND3P1-201ENST00000441336 220 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 Z73417.1-201ENST00000447373 778 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 RPL37P4-201ENST00000448908 268 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 RPS29P26-201ENST00000477483 171 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC108729.1-201ENST00000487812 947 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC110760.3-202ENST00000515177 371 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 SNORA74D-201ENST00000516404 141 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 COX6CP8-201ENST00000522620 226 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC023050.2-201ENST00000544968 387 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 DNAJC8P1-201ENST00000554535 372 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC087465.1-201ENST00000560574 245 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC090615.1-201ENST00000577519 154 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 FAM60BP-201ENST00000578364 658 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 MIR3200-201ENST00000580767 85 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AL353997.4-201ENST00000586196 166 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.53□□□□□ -2
TRAPPC4Q9Y296 DUXAP11-201ENST00000603858 526 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AL031176.1-201ENST00000604554 466 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 AP000484.1-201ENST00000620067 1252 ntBASIC2.53□□□□□ -2
TRAPPC4Q9Y296 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms