Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDC42EP3Q9UKI2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDC42EP3Q9UKI2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDC42EP3Q9UKI2 HSPA8P4-201ENST00000511877 1920 ntBASIC4.15□□□□□ -1.74
CDC42EP3Q9UKI2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CDC42EP3Q9UKI2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-562P-201ENST00000362731 107 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC068538.1-201ENST00000376856 336 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-310P-201ENST00000384655 107 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-1105P-201ENST00000384774 107 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-308P-201ENST00000390957 107 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-837P-201ENST00000391056 108 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNA5SP332-201ENST00000391063 115 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AL121834.1-202ENST00000404494 277 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AL583834.1-201ENST00000406943 343 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SKP100-201ENST00000411258 284 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 SSXP9-201ENST00000417503 292 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 OR2AH1P-201ENST00000425717 928 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RHOT1P3-201ENST00000436571 331 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RPL34P20-201ENST00000442771 351 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 NEFMP1-201ENST00000443423 1006 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 FABP5P13-201ENST00000452144 328 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RPL30P15-201ENST00000457129 321 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNA5SP43-201ENST00000516559 110 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 Y_RNA.689-201ENST00000516589 107 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SKP60-201ENST00000516985 239 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SKP258-201ENST00000517151 304 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 OR4H12P-201ENST00000556269 907 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC022884.2-201ENST00000578535 580 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 RNF138P2-201ENST00000603490 592 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC105254.2-201ENST00000603636 436 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC020910.3-201ENST00000603701 874 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 IGHV3-29-201ENST00000604817 344 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC007938.3-201ENST00000604965 623 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 ATP1B3P1-201ENST00000605365 821 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC244107.2-201ENST00000611773 76 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AC133104.2-201ENST00000615272 193 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 MIR6839-201ENST00000620425 113 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 MIR7703-201ENST00000620784 77 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AL078596.1-201ENST00000624856 447 ntBASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDC42EP3Q9UKI2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 Y_RNA.5-201ENST00000362334 102 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-1115P-201ENST00000362490 106 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC117470.1-201ENST00000381974 330 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AL391417.1-201ENST00000404100 426 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 MIR1193-201ENST00000408109 78 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 Y_RNA.646-201ENST00000410980 101 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC018865.2-201ENST00000423631 129 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 TXNP1-201ENST00000441872 371 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 RPL21P23-201ENST00000446654 460 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms