Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU6-4P-201ENST00000384205 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-5P-201ENST00000384238 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-3P-201ENST00000384314 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-2-201ENST00000384627 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-9-201ENST00000384776 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-33P-201ENST00000384793 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SCN11AQ9UI33 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN11AQ9UI33 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN11AQ9UI33 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN11AQ9UI33 AC008427.1-201ENST00000503102 655 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN11AQ9UI33 AC008526.1-201ENST00000509149 338 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 AF131216.2-201ENST00000512316 564 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-6P-201ENST00000606623 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 AC112503.2-201ENST00000609005 552 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SCN11AQ9UI33 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SCN11AQ9UI33 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SCN11AQ9UI33 SNORA51.2-201ENST00000364595 132 ntBASIC1.89□□□□□ -2.11
SCN11AQ9UI33 Z85995.1-201ENST00000415547 335 ntBASIC1.89□□□□□ -2.11
SCN11AQ9UI33 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.89□□□□□ -2.11
SCN11AQ9UI33 SNORD121B-201ENST00000458838 81 ntBASIC1.89□□□□□ -2.11
SCN11AQ9UI33 OR5H4P-201ENST00000510851 923 ntBASIC1.89□□□□□ -2.11
SCN11AQ9UI33 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.89□□□□□ -2.11
SCN11AQ9UI33 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN11AQ9UI33 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SCN11AQ9UI33 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCN11AQ9UI33 Y_RNA.374-201ENST00000365606 101 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 RPL23AP29-201ENST00000397284 453 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 RPL26P37-201ENST00000411983 438 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN11AQ9UI33 AL121871.1-201ENST00000443413 436 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN11AQ9UI33 AC107398.1-201ENST00000486904 505 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 HMGN1P7-201ENST00000491722 313 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 RNU1-92P-201ENST00000517017 135 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN11AQ9UI33 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SCN11AQ9UI33 MIR3660-201ENST00000584845 100 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 AL078603.1-201ENST00000603824 313 ntBASIC1.88□□□□□ -2.11
SCN11AQ9UI33 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.88□□□□□ -2.11
SCN11AQ9UI33 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCN11AQ9UI33 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCN11AQ9UI33 CALM1P2-201ENST00000452941 448 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AC146507.1-201ENST00000468335 354 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AC010627.1-201ENST00000503819 1294 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 HMGB3P3-201ENST00000510526 400 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 OR5AQ1P-201ENST00000527596 927 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 NBEAP1-201ENST00000554452 979 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AC007275.1-201ENST00000621243 671 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 ZNF209P-201ENST00000593450 2304 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 OR4G11P-202ENST00000642116 1414 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 SNORA7.2-201ENST00000364446 145 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 RNU6-342P-201ENST00000384521 104 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 MIR1304-201ENST00000408243 91 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AC092155.2-201ENST00000454675 477 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 SUB1P1-201ENST00000524415 382 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN11AQ9UI33 OR4G1P-201ENST00000588632 938 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 AL353770.2-201ENST00000620024 78 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
SCN11AQ9UI33 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SCN11AQ9UI33 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN11AQ9UI33 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SCN11AQ9UI33 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SCN11AQ9UI33 AL596028.1-201ENST00000326971 197 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 SNORA14A-201ENST00000364773 135 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 RNU6-1077P-201ENST00000410506 102 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN11AQ9UI33 AC009474.2-201ENST00000451383 136 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 CDC42P4-201ENST00000510507 563 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 MTCO1P47-201ENST00000523889 1271 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN11AQ9UI33 TRAV28-201ENST00000557548 323 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 SEPT7P9-203ENST00000604116 343 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 AC008083.4-201ENST00000615076 444 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 MIR6767-201ENST00000637302 66 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 ZNF33CP-201ENST00000432492 2030 ntBASIC1.86□□□□□ -2.11
SCN11AQ9UI33 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
SCN11AQ9UI33 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 RPL23AP41-201ENST00000484754 458 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 MRPL42P6-201ENST00000486397 371 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 AC093281.2-201ENST00000510153 597 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 RN7SKP49-201ENST00000516675 260 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms