Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL627309.6-201ENST00000606857 840 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC004067.1-201ENST00000608733 700 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AL357080.1-201ENST00000617394 239 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC002550.2-201ENST00000621246 394 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC073308.1-201ENST00000623696 305 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 OR1S1-201ENST00000624470 978 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 MTCO1P9-201ENST00000505577 1534 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
KLHL28Q9NXS3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
KLHL28Q9NXS3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 SNORA36C-201ENST00000384289 132 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 MIR514A1-201ENST00000385133 98 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 SNORA40.2-201ENST00000390847 128 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 RNU6-298P-201ENST00000390888 96 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC018630.2-202ENST00000422992 927 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AL365496.1-201ENST00000426885 215 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 GTF2IP3-201ENST00000433887 494 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 ARPC3P5-201ENST00000448802 534 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 RPL31P41-201ENST00000477967 372 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC079203.1-201ENST00000487972 404 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC104629.1-201ENST00000494226 508 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 TTC39CP1-201ENST00000512513 755 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 RPL23AP94-201ENST00000512518 302 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC006499.2-201ENST00000513470 337 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 SCARNA15.2-201ENST00000516409 127 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 RNA5SP471-201ENST00000516971 106 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 MTND1P36-201ENST00000522384 936 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC068313.1-201ENST00000604028 1008 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC092574.1-201ENST00000609771 420 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC245517.5-201ENST00000611529 162 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC104985.3-201ENST00000623479 597 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 AC096644.4-201ENST00000563417 2912 ntBASIC2.65□□□□□ -1.99
KLHL28Q9NXS3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 MIR26A1-201ENST00000362205 77 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 Y_RNA.548-201ENST00000384656 105 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 MIR325-201ENST00000385260 98 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AL512633.1-201ENST00000399931 655 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 RPL7P8-201ENST00000411964 730 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 SPA17P1-201ENST00000416656 452 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AL714022.1-201ENST00000439897 151 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AL109741.2-201ENST00000455561 343 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 RPS29P26-201ENST00000477483 171 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AC116337.2-201ENST00000477662 156 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AL049874.1-201ENST00000489560 388 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 XKRY-201ENST00000510392 1100 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AC010546.1-201ENST00000569391 485 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 MIR3605-201ENST00000583214 100 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AL158211.4-201ENST00000606988 584 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AC123767.1-202ENST00000620407 817 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 AC008443.7-201ENST00000622195 246 ntBASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KLHL28Q9NXS3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC080100.1-201ENST00000624239 5356 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AL022578.1-201ENST00000439330 1433 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 HMGN2P35-201ENST00000412164 270 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 Z85995.1-201ENST00000415547 335 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AL512844.2-201ENST00000433990 593 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 RNU7-136P-201ENST00000458819 69 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC113347.3-201ENST00000509113 148 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms