Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.48□□□□□ -1.85
KLHL1Q9NR64 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
KLHL1Q9NR64 MTND5P26-201ENST00000426018 1752 ntBASIC3.48□□□□□ -1.85
KLHL1Q9NR64 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KLHL1Q9NR64 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
KLHL1Q9NR64 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KLHL1Q9NR64 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 Y_RNA.46-201ENST00000362695 102 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 SNORD46.1-201ENST00000364139 104 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 RNA5SP387-201ENST00000364226 106 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 HLFP1-201ENST00000402375 499 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AL359704.1-201ENST00000411586 781 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 RPS29P4-201ENST00000414733 161 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AC068533.1-201ENST00000418542 415 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AL137014.1-201ENST00000420490 1226 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 HMGN2P31-201ENST00000432430 273 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 RABEPKP1-201ENST00000440529 1026 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 PGBD4P3-201ENST00000440731 581 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 MTND6P13-201ENST00000443510 523 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 MTND1P1-201ENST00000445453 368 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AC093899.1-201ENST00000457984 376 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 snoU13.22-201ENST00000459428 104 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 RPS3AP17-201ENST00000472594 777 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 MTND1P3-201ENST00000484956 952 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 RNA5SP164-201ENST00000516533 110 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 RNU6-430P-201ENST00000517078 107 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 DEFB108A-201ENST00000530110 222 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AC138649.3-201ENST00000622154 254 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 AC099654.13-201ENST00000639774 207 ntBASIC3.47□□□□□ -1.85
KLHL1Q9NR64 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
KLHL1Q9NR64 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
KLHL1Q9NR64 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
KLHL1Q9NR64 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 MIR208A-201ENST00000362287 71 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 SNORA70.4-201ENST00000365509 134 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 MIR199A2-201ENST00000385289 110 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 SNORD115.1-201ENST00000391109 76 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 RNA5SP44-201ENST00000410446 133 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 NEK4P1-201ENST00000433383 879 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 ARPC3P1-201ENST00000437218 533 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 RPL17P49-201ENST00000443728 411 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC098824.1-201ENST00000453565 980 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AP1S2P1-201ENST00000457344 379 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AP002884.2-201ENST00000471647 395 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC105252.1-201ENST00000503089 286 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 KLHL2P1-201ENST00000508691 521 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 RN7SKP83-201ENST00000516512 178 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 SYF2P1-201ENST00000550658 413 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC034268.2-201ENST00000571784 482 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 HMGN1P30-201ENST00000589286 268 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 CKS1BP3-201ENST00000600888 237 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AL161729.4-201ENST00000604650 476 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC019176.2-201ENST00000611579 315 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC084757.4-201ENST00000616350 526 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 AC095031.1-201ENST00000623685 672 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KLHL1Q9NR64 FARSBP1-201ENST00000435808 1778 ntBASIC3.46□□□□□ -1.86
KLHL1Q9NR64 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KLHL1Q9NR64 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
KLHL1Q9NR64 RIOK3P1-201ENST00000418778 1528 ntBASIC3.45□□□□□ -1.86
KLHL1Q9NR64 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
KLHL1Q9NR64 ZNF826P-207ENST00000622273 1910 ntBASIC3.45□□□□□ -1.86
KLHL1Q9NR64 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms