Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC138915.3-201ENST00000562908 1389 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MIR30E-201ENST00000362104 92 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 RNU6-989P-201ENST00000362756 107 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 RNU5E-5P-201ENST00000365379 116 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 SNORD116-4-201ENST00000384733 96 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MTCYBP36-201ENST00000404146 440 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AP000567.1-201ENST00000406413 156 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MTCO2P34-201ENST00000421994 607 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 RPL7P36-201ENST00000444633 681 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AP000936.2-201ENST00000447151 681 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 ELOCP23-201ENST00000452014 332 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC006390.1-201ENST00000508068 283 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 RN7SKP289-201ENST00000517244 295 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 PSMA2P1-201ENST00000526365 646 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MTND4LP18-201ENST00000526864 291 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 SYF2P1-201ENST00000550658 413 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC006362.1-201ENST00000567392 174 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 MIR3690-201ENST00000580266 75 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC022146.1-201ENST00000595307 847 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC119751.7-201ENST00000600494 245 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC004853.1-201ENST00000604902 698 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC091965.4-201ENST00000607691 587 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 AC110801.1-201ENST00000623590 212 ntBASIC3.77□□□□□ -1.81
DDX4Q9NQI0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX4Q9NQI0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 RNA5SP295-201ENST00000362655 121 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 RNU6-97P-201ENST00000363387 104 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 SNORA11.2-201ENST00000408318 127 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 RPL35AP12-201ENST00000425362 338 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 MTCYBP45-201ENST00000435243 565 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC108734.1-201ENST00000439549 399 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 MTCO1P19-201ENST00000443487 500 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 RNU7-170P-201ENST00000459303 61 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC112204.1-201ENST00000502591 103 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 MTCO2P32-201ENST00000514865 403 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 RNU6-714P-201ENST00000516963 103 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC022080.3-201ENST00000544433 482 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 SETP2-201ENST00000553886 926 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC103987.3-201ENST00000582071 292 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC055876.5-201ENST00000605667 259 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC027807.2-201ENST00000616099 408 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC108479.2-201ENST00000617314 601 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 MIR6852-201ENST00000621699 66 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
DDX4Q9NQI0 AP001350.1-201ENST00000601906 1524 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 RNU6-853P-201ENST00000364306 107 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 Y_RNA.510-201ENST00000384511 114 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 Y_RNA.559-201ENST00000384686 107 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 MIR591-201ENST00000385290 95 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC127526.1-201ENST00000417526 366 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC006366.1-201ENST00000422002 759 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 COTL1P1-201ENST00000422309 375 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL445669.1-201ENST00000426743 755 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms