Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 MIR3690-201ENST00000580266 75 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 HMGN1P30-201ENST00000589286 268 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AL161729.4-201ENST00000604650 476 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC068944.2-201ENST00000610373 403 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC048347.1-201ENST00000624621 427 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AL353746.1-201ENST00000566293 6881 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 GABPAP-201ENST00000419271 1356 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 Y_RNA.548-201ENST00000384656 105 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 MIR449B-201ENST00000384995 97 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 HMGB3P23-201ENST00000414981 585 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 OR1AA1P-201ENST00000419597 916 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 HMGB1P12-201ENST00000438594 598 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 GAPDHP17-201ENST00000449858 1001 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 RPL9P32-201ENST00000464118 620 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC034236.1-201ENST00000469891 373 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AL358832.1-201ENST00000497800 389 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 UBE2CP3-201ENST00000502715 450 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 NDUFB4P2-201ENST00000509515 391 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 RN7SKP244-201ENST00000516513 307 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 RNU6-714P-201ENST00000516963 103 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 IGKV2D-19-201ENST00000523346 262 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 TPRKBP2-201ENST00000565969 475 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 MIR3944-201ENST00000581277 108 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 UBE2L4-201ENST00000587688 464 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 XIAPP1-201ENST00000603162 600 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC126118.1-201ENST00000607744 628 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC012531.5-201ENST00000611375 151 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC091304.9-201ENST00000612091 226 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 U4.6-201ENST00000621618 127 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AL158801.5-201ENST00000623123 465 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AC066616.2-201ENST00000559334 1481 ntBASIC3.28□□□□□ -1.88
SLC52A3Q9NQ40 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 U8.3-201ENST00000363321 132 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 RNA5SP171-201ENST00000391071 115 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AC078974.1-201ENST00000411597 223 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 ATP5A1P2-201ENST00000412323 255 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AL356968.1-201ENST00000416622 474 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 C1DP2-201ENST00000418167 426 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 RPS15AP6-201ENST00000420703 385 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 MTND4LP10-201ENST00000435146 291 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 MTND1P1-201ENST00000445453 368 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AL358232.1-201ENST00000448030 501 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 HMGB1P15-201ENST00000453854 435 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 ST13P14-201ENST00000474095 734 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AC126182.1-201ENST00000478134 357 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 RNU6-201P-201ENST00000517100 61 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 MTCO2P4-201ENST00000517968 247 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 MTND4LP26-201ENST00000518144 282 ntBASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC52A3Q9NQ40 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms