Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC112204.3-201ENST00000623822 332 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC007256.1-201ENST00000392253 2765 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC021755.1-201ENST00000559747 1447 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 RNU6-283P-201ENST00000364788 107 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 RNU6-278P-201ENST00000390945 109 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 RPL7P60-201ENST00000397636 735 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AP000567.1-201ENST00000406413 156 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AL365338.1-201ENST00000422282 858 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 MRPS31P2-201ENST00000451581 518 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AL122001.1-201ENST00000457027 370 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 HSPE1P6-201ENST00000479457 291 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 PCBP2P3-201ENST00000509726 843 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC117532.1-201ENST00000514638 323 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 RN7SKP57-201ENST00000517248 293 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC022616.6-201ENST00000520479 119 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 SUMO2P20-201ENST00000520803 283 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC012414.6-201ENST00000568241 401 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 KC877982.1-201ENST00000602313 470 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 RNU6-87P-201ENST00000607561 108 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC103710.1-201ENST00000610003 901 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 TUG1_2.1-201ENST00000614234 87 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AC119674.1-207ENST00000641355 633 ntBASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
POLR1BQ9H9Y6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC090740.1-201ENST00000623193 2262 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 SNORA23-201ENST00000365128 182 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 MIR490-201ENST00000384865 128 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 CCNG1P1-201ENST00000406783 885 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC006366.1-201ENST00000422002 759 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 MTND1P28-201ENST00000435623 950 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 SNORA71B-202ENST00000439232 272 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 ST13P20-201ENST00000447996 1065 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC099563.1-201ENST00000456086 418 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 RNU7-170P-201ENST00000459303 61 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC109464.2-201ENST00000510242 943 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 CDC42P4-201ENST00000510507 563 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 MTND5P13-201ENST00000513046 1079 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AP003467.2-201ENST00000520175 319 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC100870.1-201ENST00000522035 505 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC008489.1-201ENST00000524271 483 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AP002748.2-201ENST00000528671 348 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC007458.1-201ENST00000542812 373 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 NCAPGP2-201ENST00000557911 754 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC055876.1-202ENST00000567053 138 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 RPL23AP84-201ENST00000571193 464 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 MIR3146-201ENST00000580367 79 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC005771.1-201ENST00000585581 349 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 BNIP3P8-201ENST00000597863 560 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC080013.6-201ENST00000606185 215 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 BX664608.1-201ENST00000610519 487 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC013476.2-201ENST00000614456 459 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AL355365.1-201ENST00000616480 294 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms