Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAF1Q9H7N4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAF1Q9H7N4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SCAF1Q9H7N4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC9.35□□□□□ -0.91
SCAF1Q9H7N4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SCAF1Q9H7N4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAF1Q9H7N4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAF1Q9H7N4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
SCAF1Q9H7N4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 RNU6-766P-201ENST00000362478 107 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 Y_RNA.114-201ENST00000363265 113 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 MIR488-201ENST00000365739 83 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 RNU6-756P-201ENST00000383997 107 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 RNU6-142P-201ENST00000384019 107 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 RNU6-1152P-201ENST00000384576 107 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AC090774.1-201ENST00000435925 246 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 RN7SL643P-201ENST00000471845 291 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 RPL7AP23-201ENST00000482625 776 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AC093270.2-201ENST00000486157 792 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 CREM-238ENST00000488741 651 ntTSL 2 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AC083906.1-201ENST00000509298 406 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AC004980.4-201ENST00000513375 203 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AC020914.7-201ENST00000594477 545 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AL442128.1-201ENST00000615151 90 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AL445567.2-201ENST00000618935 498 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 TCL6_3.1-201ENST00000619064 137 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 Six3os1_1.1-201ENST00000620900 87 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 AC004158.1-201ENST00000564508 4319 ntBASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAF1Q9H7N4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC9.34□□□□□ -0.92
SCAF1Q9H7N4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 RNU6-1286P-201ENST00000383871 107 ntBASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 MT-TT-201ENST00000387460 66 ntBASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 RNU6-159P-201ENST00000391080 106 ntBASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 AC013442.1-201ENST00000397347 228 ntBASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 AC010095.1-201ENST00000443543 144 ntBASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 RNA5SP340-201ENST00000517132 107 ntBASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 AC015720.1-201ENST00000565251 277 ntBASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 AP001264.1-201ENST00000620602 703 ntBASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SCAF1Q9H7N4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 RNU6-801P-201ENST00000364087 105 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 CYCSP52-201ENST00000422857 310 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 RPS27AP12-201ENST00000429552 465 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 CYCSP12-201ENST00000437729 300 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AC025470.1-201ENST00000510053 2032 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 RNA5SP418-201ENST00000515951 117 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 SNORA40.13-201ENST00000516379 120 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 GUCY1B2-204ENST00000531898 1979 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AC111186.1-201ENST00000604684 130 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AL360181.4-201ENST00000621752 134 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 AC091932.3-201ENST00000624223 323 ntBASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 258.5 ms