Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC116447.1-201ENST00000613153 453 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MEIS3Q99687 AC006338.1-201ENST00000618453 749 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.8□□□□□ -1.8
MEIS3Q99687 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.8□□□□□ -1.8
MEIS3Q99687 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MEIS3Q99687 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.8□□□□□ -1.8
MEIS3Q99687 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MEIS3Q99687 AL353743.1-202ENST00000431724 1695 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 SNRPEP3-201ENST00000338402 276 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 MIR422A-201ENST00000362286 90 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 Y_RNA.409-201ENST00000383990 98 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 SNORA46-201ENST00000384762 135 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 MIR181A1-201ENST00000385026 110 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 SNRPEP2-201ENST00000397592 279 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MEIS3Q99687 FCF1P10-201ENST00000407590 479 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.79□□□□□ -1.8
MEIS3Q99687 RPL7P30-201ENST00000420888 709 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AL353597.2-202ENST00000434901 373 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.79□□□□□ -1.8
MEIS3Q99687 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.79□□□□□ -1.8
MEIS3Q99687 DPPA3P1-201ENST00000448050 469 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.79□□□□□ -1.8
MEIS3Q99687 RNU6-1218P-201ENST00000458990 108 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AC013828.1-201ENST00000481845 158 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.79□□□□□ -1.8
MEIS3Q99687 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AP001646.1-201ENST00000527936 915 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.79□□□□□ -1.8
MEIS3Q99687 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MEIS3Q99687 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.79□□□□□ -1.8
MEIS3Q99687 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.79□□□□□ -1.8
MEIS3Q99687 MIR4325-201ENST00000583049 90 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 VN1R79P-201ENST00000593540 513 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AC008687.2-201ENST00000597865 520 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AC090578.1-201ENST00000604955 591 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.79□□□□□ -1.8
MEIS3Q99687 DUXAP9-208ENST00000622815 614 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.79□□□□□ -1.8
MEIS3Q99687 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
MEIS3Q99687 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MEIS3Q99687 AC046144.1-201ENST00000478559 1853 ntBASIC3.79□□□□□ -1.8
MEIS3Q99687 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MEIS3Q99687 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
MEIS3Q99687 AL354685.2-201ENST00000448218 1447 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 MIR148B-201ENST00000362252 99 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 Y_RNA.38-201ENST00000362617 102 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 RNU6-289P-201ENST00000364093 107 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 Y_RNA.813-201ENST00000364639 102 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 MIR128-1-201ENST00000384921 82 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 SNORA48.2-201ENST00000390926 124 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AC138393.2-201ENST00000414742 246 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 USP9YP36-201ENST00000424581 829 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.78□□□□□ -1.8
MEIS3Q99687 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.78□□□□□ -1.8
MEIS3Q99687 RPL37P21-201ENST00000435890 276 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AC098614.3-201ENST00000438957 440 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 MTATP6P30-201ENST00000443540 664 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.78□□□□□ -1.8
MEIS3Q99687 RPL7L1P1-201ENST00000448259 785 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AL590365.1-201ENST00000450788 243 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.78□□□□□ -1.8
MEIS3Q99687 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.78□□□□□ -1.8
MEIS3Q99687 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.78□□□□□ -1.8
MEIS3Q99687 AC114967.1-201ENST00000504890 259 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.78□□□□□ -1.8
MEIS3Q99687 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.78□□□□□ -1.8
MEIS3Q99687 MTND5P4-201ENST00000514978 288 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AC104383.1-201ENST00000530297 370 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.78□□□□□ -1.8
MEIS3Q99687 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.78□□□□□ -1.8
MEIS3Q99687 AC009977.1-201ENST00000586015 570 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.78□□□□□ -1.8
MEIS3Q99687 BNIP3P11-201ENST00000603878 563 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AC010200.2-201ENST00000605098 235 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 RNU6-88P-201ENST00000606801 100 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AL158211.4-201ENST00000606988 584 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.78□□□□□ -1.8
MEIS3Q99687 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MEIS3Q99687 AC025253.1-201ENST00000613623 543 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 AC063943.3-201ENST00000615562 356 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
MEIS3Q99687 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.78□□□□□ -1.8
MEIS3Q99687 AC110994.2-201ENST00000635481 492 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MEIS3Q99687 AL451142.2-201ENST00000429076 2090 ntBASIC3.78□□□□□ -1.8
MEIS3Q99687 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
MEIS3Q99687 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.77□□□□□ -1.81
MEIS3Q99687 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MEIS3Q99687 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms