Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AL157394.1-201ENST00000562983 1224 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.27□□□□□ -1.89
CDCA3Q99618 MIR3915-201ENST00000578518 97 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 OR4K8P-201ENST00000578842 1048 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.27□□□□□ -1.89
CDCA3Q99618 MIR3945-201ENST00000581853 98 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AL365503.1-201ENST00000605247 905 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 RMST_8.1-201ENST00000610287 165 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC013412.1-201ENST00000610687 192 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC100793.4-201ENST00000613683 429 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.27□□□□□ -1.89
CDCA3Q99618 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.27□□□□□ -1.89
CDCA3Q99618 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDCA3Q99618 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AP001350.1-201ENST00000601906 1524 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDCA3Q99618 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDCA3Q99618 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDCA3Q99618 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDCA3Q99618 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDCA3Q99618 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDCA3Q99618 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDCA3Q99618 SNORA31-201ENST00000362607 130 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 RNU6-97P-201ENST00000363387 104 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 RNU6-851P-201ENST00000384565 107 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 MIR591-201ENST00000385290 95 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 AL445529.1-201ENST00000398713 389 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.26□□□□□ -1.89
CDCA3Q99618 RPS15AP6-201ENST00000420703 385 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 AC079780.1-201ENST00000428259 207 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.26□□□□□ -1.89
CDCA3Q99618 RPL32P28-201ENST00000443577 397 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.26□□□□□ -1.89
CDCA3Q99618 AP000542.1-201ENST00000448473 371 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 RPS24P6-201ENST00000452670 400 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.26□□□□□ -1.89
CDCA3Q99618 AC008481.1-201ENST00000463278 396 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 AC114967.1-201ENST00000504890 259 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.26□□□□□ -1.89
CDCA3Q99618 OR5D17P-201ENST00000531492 978 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 AC018630.1-201ENST00000541376 925 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 AC107016.2-201ENST00000547968 190 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.26□□□□□ -1.89
CDCA3Q99618 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.26□□□□□ -1.89
CDCA3Q99618 WISP1-OT1-201ENST00000602893 642 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 Z99497.2-201ENST00000603634 310 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 AC106028.5-201ENST00000610332 395 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 CU459211.1-201ENST00000635667 749 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDCA3Q99618 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDCA3Q99618 AL672296.1-201ENST00000427780 2158 ntBASIC3.26□□□□□ -1.89
CDCA3Q99618 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CDCA3Q99618 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDCA3Q99618 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CDCA3Q99618 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDCA3Q99618 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDCA3Q99618 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.25□□□□□ -1.89
CDCA3Q99618 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDCA3Q99618 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDCA3Q99618 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDCA3Q99618 PWAR6-201ENST00000552334 4618 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDCA3Q99618 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDCA3Q99618 RNU6-853P-201ENST00000364306 107 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 MIR607-201ENST00000385241 96 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDCA3Q99618 MIR1305-201ENST00000408300 86 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.25□□□□□ -1.89
CDCA3Q99618 RNA5SP184-201ENST00000411071 108 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC099677.1-201ENST00000420575 175 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 RPL21P66-201ENST00000426566 466 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 LARP1BP3-201ENST00000437229 869 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC108734.1-201ENST00000439549 399 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AL135938.1-201ENST00000443141 297 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.25□□□□□ -1.89
CDCA3Q99618 ZNF114P1-201ENST00000453500 292 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.25□□□□□ -1.89
CDCA3Q99618 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.25□□□□□ -1.89
CDCA3Q99618 OR6K1P-201ENST00000456766 971 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.25□□□□□ -1.89
CDCA3Q99618 AP002884.2-201ENST00000471647 395 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 RPS4XP22-201ENST00000480755 780 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 RPL31P13-201ENST00000484151 370 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 FCF1P3-201ENST00000496394 590 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC096751.1-202ENST00000502691 1067 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC022447.3-201ENST00000506865 495 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.25□□□□□ -1.89
CDCA3Q99618 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 RN7SKP244-201ENST00000516513 307 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC068587.4-201ENST00000533893 186 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.25□□□□□ -1.89
CDCA3Q99618 AL121576.1-201ENST00000556055 276 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms