Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.19□□□□□ -2.22
SPENQ96T58 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.18□□□□□ -2.22
SPENQ96T58 RNU1-133P-201ENST00000364867 167 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.18□□□□□ -2.22
SPENQ96T58 AL078601.1-201ENST00000444542 271 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.18□□□□□ -2.22
SPENQ96T58 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
SPENQ96T58 AC007342.9-201ENST00000623877 1385 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.18□□□□□ -2.22
SPENQ96T58 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SPENQ96T58 U3.40-201ENST00000408706 208 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 EBAG9P1-201ENST00000418955 543 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.18□□□□□ -2.22
SPENQ96T58 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SPENQ96T58 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SPENQ96T58 MIR193B-201ENST00000384907 83 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 CYCSP33-201ENST00000414485 327 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 AL691517.1-201ENST00000440833 1235 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.18□□□□□ -2.22
SPENQ96T58 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.18□□□□□ -2.22
SPENQ96T58 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.18□□□□□ -2.22
SPENQ96T58 MIR3935-201ENST00000583472 104 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 AC090525.3-201ENST00000605601 189 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.18□□□□□ -2.22
SPENQ96T58 PABPC1P9-201ENST00000426076 1612 ntBASIC1.18□□□□□ -2.22
SPENQ96T58 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
SPENQ96T58 RNA5SP239-201ENST00000410218 129 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 BMI1P1-201ENST00000445879 941 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
SPENQ96T58 AP004607.1-201ENST00000524456 203 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.17□□□□□ -2.22
SPENQ96T58 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.17□□□□□ -2.22
SPENQ96T58 AC011890.2-201ENST00000613393 294 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.17□□□□□ -2.22
SPENQ96T58 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.17□□□□□ -2.22
SPENQ96T58 HMGN2P38-201ENST00000423806 265 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.17□□□□□ -2.22
SPENQ96T58 CBX3P8-201ENST00000532412 525 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AP000676.4-201ENST00000624659 623 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AC111188.2-201ENST00000529697 1387 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 HSPE1P11-201ENST00000339579 310 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.17□□□□□ -2.22
SPENQ96T58 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.17□□□□□ -2.22
SPENQ96T58 AC098934.3-201ENST00000430450 190 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AC073901.1-201ENST00000462471 408 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.17□□□□□ -2.22
SPENQ96T58 RNU6-113P-201ENST00000516653 101 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 AL159169.2-201ENST00000610061 1269 ntBASIC1.17□□□□□ -2.22
SPENQ96T58 TEX21P-201ENST00000447107 1476 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SPENQ96T58 RPS12P24-201ENST00000412619 387 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.16□□□□□ -2.22
SPENQ96T58 AP000873.1-201ENST00000463987 400 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 AC025755.1-201ENST00000521306 278 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 AP003033.1-201ENST00000527244 415 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
SPENQ96T58 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SPENQ96T58 SNORA62.2-201ENST00000364672 152 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 Y_RNA.471-201ENST00000384312 102 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.16□□□□□ -2.22
SPENQ96T58 NEFMP1-201ENST00000443423 1006 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 SNORA31.26-201ENST00000517250 137 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 AC092451.2-201ENST00000538746 658 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.16□□□□□ -2.22
SPENQ96T58 AIMP1P2-201ENST00000425294 312 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.16□□□□□ -2.22
SPENQ96T58 CFTRP1-201ENST00000456646 183 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.16□□□□□ -2.22
SPENQ96T58 MKKS-204ENST00000639674 192 ntBASIC1.16□□□□□ -2.22
SPENQ96T58 RPL26P37-201ENST00000411983 438 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.15□□□□□ -2.23
SPENQ96T58 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.15□□□□□ -2.23
SPENQ96T58 AC090821.2-201ENST00000523552 176 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 MIR3973-201ENST00000579824 107 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.15□□□□□ -2.23
SPENQ96T58 AL354685.2-201ENST00000448218 1447 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 AC018630.2-201ENST00000534866 2403 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 Y_RNA.303-201ENST00000364998 94 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.15□□□□□ -2.23
SPENQ96T58 AC008850.1-201ENST00000427546 362 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.15□□□□□ -2.23
SPENQ96T58 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.15□□□□□ -2.23
SPENQ96T58 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.15□□□□□ -2.23
SPENQ96T58 FO393415.2-201ENST00000480085 343 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 AC023790.1-201ENST00000482174 347 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.15□□□□□ -2.23
SPENQ96T58 AL590233.1-201ENST00000430017 456 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.14□□□□□ -2.23
SPENQ96T58 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.14□□□□□ -2.23
SPENQ96T58 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.14□□□□□ -2.23
SPENQ96T58 MIR6086-201ENST00000638065 55 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 RNU6-198P-201ENST00000384258 104 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.14□□□□□ -2.23
SPENQ96T58 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.14□□□□□ -2.23
SPENQ96T58 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.14□□□□□ -2.23
SPENQ96T58 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.14□□□□□ -2.23
SPENQ96T58 RNU1-92P-201ENST00000517017 135 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms