Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 COX4I1P2-201ENST00000447446 547 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 USP9YP23-201ENST00000455085 407 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 RN7SL214P-201ENST00000487317 265 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 RPL22P13-201ENST00000493291 347 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 AC104164.2-201ENST00000496953 495 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.83□□□□□ -1.64
CITED4Q96RK1 IGKV3D-34-201ENST00000522638 302 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.83□□□□□ -1.64
CITED4Q96RK1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.83□□□□□ -1.64
CITED4Q96RK1 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 AC020634.1-201ENST00000608701 549 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 MIR8076-201ENST00000611401 83 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 MIR4302-201ENST00000638058 60 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.83□□□□□ -1.64
CITED4Q96RK1 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CITED4Q96RK1 ZNF299P-201ENST00000406845 1804 ntBASIC4.83□□□□□ -1.64
CITED4Q96RK1 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.83□□□□□ -1.64
CITED4Q96RK1 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.83□□□□□ -1.64
CITED4Q96RK1 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC092681.1-201ENST00000297369 291 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 RNU6-428P-201ENST00000362942 107 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 SNORA73.1-201ENST00000363107 205 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 Y_RNA.106-201ENST00000363189 100 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 Y_RNA.556-201ENST00000384677 113 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 RNU6-713P-201ENST00000384761 107 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 RPS29P14-201ENST00000431518 171 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 VDAC1P3-201ENST00000434069 851 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 SNRPEP9-201ENST00000436794 238 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 Z82210.1-201ENST00000440037 231 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 PCNPP5-201ENST00000452246 481 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC078817.1-201ENST00000492623 435 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC078918.1-201ENST00000498515 228 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 SNORA40.14-201ENST00000516543 86 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 RNU6-612P-201ENST00000516909 102 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 Y_RNA.715-201ENST00000517082 110 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 CYCSP25-201ENST00000525280 316 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 AP000889.1-201ENST00000530968 660 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 RN7SL290P-201ENST00000578661 300 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 AC119403.2-201ENST00000590960 598 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 AL139395.1-201ENST00000603662 160 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 MTND4LP5-201ENST00000605152 292 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 AL021879.1-201ENST00000611756 288 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 MTND5P27-201ENST00000428871 1720 ntBASIC4.82□□□□□ -1.64
CITED4Q96RK1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CITED4Q96RK1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CITED4Q96RK1 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CITED4Q96RK1 AC104966.1-201ENST00000467010 1464 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 AL450345.1-202ENST00000605741 3881 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CITED4Q96RK1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CITED4Q96RK1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 OR4F13P-202ENST00000560066 2054 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 AL359693.1-201ENST00000614959 2407 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CITED4Q96RK1 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CITED4Q96RK1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CITED4Q96RK1 RNU6-50P-201ENST00000362356 103 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 RN7SKP115-201ENST00000363177 317 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 RNA5SP167-201ENST00000365461 116 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CITED4Q96RK1 MIR628-201ENST00000385229 95 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 U3.42-201ENST00000408746 214 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 AL117339.3-201ENST00000418733 162 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 AL159987.2-201ENST00000432754 307 ntBASIC4.81□□□□□ -1.64
CITED4Q96RK1 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.81□□□□□ -1.64
CITED4Q96RK1 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms