Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC023043.4-201ENST00000612081 449 ntBASIC6.08□□□□□ -1.44
LRCH3Q96II8 MIR6864-201ENST00000617935 70 ntBASIC6.08□□□□□ -1.44
LRCH3Q96II8 AC099506.2-201ENST00000623074 221 ntBASIC6.08□□□□□ -1.44
LRCH3Q96II8 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.08□□□□□ -1.44
LRCH3Q96II8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.08□□□□□ -1.44
LRCH3Q96II8 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
LRCH3Q96II8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.08□□□□□ -1.44
LRCH3Q96II8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
LRCH3Q96II8 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
LRCH3Q96II8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.08□□□□□ -1.44
LRCH3Q96II8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
LRCH3Q96II8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LRCH3Q96II8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 MAPK10-338ENST00000641647 3362 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 AC092070.2-203ENST00000598377 3644 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 RNU6-653P-201ENST00000363074 106 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 Y_RNA.357-201ENST00000365487 109 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 RNU6-1056P-201ENST00000383996 107 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 Y_RNA.534-201ENST00000384599 112 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 SNORA46.1-201ENST00000391069 153 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 TOMM22P6-201ENST00000465035 409 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 RN7SL41P-201ENST00000476144 297 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 AC005840.1-201ENST00000498412 377 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 BNIP3P5-201ENST00000562290 498 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 MIR4423-201ENST00000580922 80 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 MIR4270-201ENST00000581799 70 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 AC005828.6-201ENST00000606610 232 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 Y_RNA.802-201ENST00000614892 130 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 AC008873.1-201ENST00000625051 138 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 AC100778.3-201ENST00000580060 1750 ntBASIC6.07□□□□□ -1.44
LRCH3Q96II8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.07□□□□□ -1.44
LRCH3Q96II8 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRCH3Q96II8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 AC022164.1-201ENST00000568767 2673 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-222P-201ENST00000362438 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 Y_RNA.23-201ENST00000362496 106 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNA5SP388-201ENST00000362584 119 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-37P-201ENST00000362692 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-11P-201ENST00000364234 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-7-201ENST00000364784 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-8-201ENST00000365467 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-25P-201ENST00000383873 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-1-201ENST00000383898 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-36P-201ENST00000384172 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-4P-201ENST00000384205 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-5P-201ENST00000384238 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-3P-201ENST00000384314 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-16P-201ENST00000384385 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-15P-201ENST00000384534 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-2-201ENST00000384627 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-29P-201ENST00000384637 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-9-201ENST00000384776 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNY4P18-201ENST00000391107 89 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU5A-5P-201ENST00000411054 116 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 SDC4P-201ENST00000453285 601 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 RPS27AP13-201ENST00000498403 237 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RN7SKP67-201ENST00000515905 235 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 MIR892C-201ENST00000516410 77 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 AK6P2-201ENST00000549020 471 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 MIR3613-201ENST00000579844 87 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 AL133393.1-201ENST00000603277 287 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 RNU6-6P-201ENST00000606623 107 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 AL008718.3-201ENST00000610217 321 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms