Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HMGB3P26-201ENST00000560051 582 ntBASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 RPL23AP87-202ENST00000573039 466 ntBASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 MIR4270-201ENST00000581799 70 ntBASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 AC015914.2-201ENST00000618167 288 ntBASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 AL078596.1-201ENST00000624856 447 ntBASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ARHGEF39Q8N4T4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 RNA5SP235-201ENST00000365411 114 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AC117470.1-201ENST00000381974 330 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 Y_RNA.480-201ENST00000384364 102 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AC097374.1-203ENST00000400783 485 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 RPL21P90-201ENST00000415692 466 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AL590632.1-201ENST00000424289 371 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 EIF4HP2-201ENST00000424380 563 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 CKS1BP6-201ENST00000424932 240 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 MTCO1P39-201ENST00000426148 480 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AL359672.1-201ENST00000442302 409 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AC011753.3-201ENST00000443436 406 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 RPS29P22-201ENST00000472363 168 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 HSPE1P6-201ENST00000479457 291 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AP000926.1-201ENST00000479573 241 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 RPS15AP34-201ENST00000487776 387 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 RNU6-914P-201ENST00000516749 109 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 CDH12P4-201ENST00000517835 295 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 CDH12P3-201ENST00000517935 295 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 CDH12P1-201ENST00000518435 295 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 BNIP3P1-201ENST00000547295 580 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AC025423.5-201ENST00000550230 219 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 CYCSP40-201ENST00000575927 294 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 FAM60BP-201ENST00000578364 658 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 AC091925.1-201ENST00000623204 462 ntBASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ARHGEF39Q8N4T4 SCARNA15-201ENST00000607520 4325 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AL731566.1-201ENST00000620490 1937 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 OR5P1P-201ENST00000299512 925 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 Y_RNA.144-201ENST00000363521 113 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 RNU6-371P-201ENST00000364283 108 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 RNU6-1040P-201ENST00000383974 107 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 RNU6-328P-201ENST00000390887 106 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 RNU6-1050P-201ENST00000410388 107 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 RPL7P37-201ENST00000425095 738 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AC079168.2-201ENST00000453977 416 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AC010326.1-201ENST00000462726 602 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AC096745.1-201ENST00000509945 370 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 RN7SKP295-201ENST00000517264 153 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 DNAJC8P1-201ENST00000554535 372 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 RN7SL652P-201ENST00000577769 300 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 MIR3671-201ENST00000580455 88 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 MIR3936-201ENST00000584304 110 ntBASIC4.5□□□□□ -1.69
ARHGEF39Q8N4T4 AP000654.2-201ENST00000605633 586 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms