Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC068305.1-201ENST00000497406 726 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AL358832.1-201ENST00000497800 389 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC105252.1-201ENST00000503089 286 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 VN1R104P-201ENST00000505115 1009 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 RNU6-430P-201ENST00000517078 107 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AP003033.1-201ENST00000527244 415 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AP004242.1-201ENST00000533701 349 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC008011.1-201ENST00000545989 227 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC125611.2-201ENST00000551907 647 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 EIF1P4-201ENST00000572664 335 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AL161729.4-201ENST00000604650 476 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC008277.2-201ENST00000605196 797 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 RNU4-1-201ENST00000363925 141 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 RNY3P13-201ENST00000365542 102 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 MIR218-2-201ENST00000385006 110 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 RPS3AP36-201ENST00000398190 775 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 RNU6-195P-201ENST00000411352 109 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC127391.1-201ENST00000411737 98 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 RPL30P2-201ENST00000414021 291 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 BX295541.1-201ENST00000417774 250 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 RPS15AP12-201ENST00000419498 388 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 PIGFP2-201ENST00000421400 651 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC137499.1-201ENST00000427602 88 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC079780.1-201ENST00000428259 207 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 USP9YP15-201ENST00000442391 422 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 ELOCP30-201ENST00000447108 299 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 PRSS3P4-201ENST00000453323 162 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 TRBV12-2-201ENST00000489763 344 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 Vault.3-201ENST00000516676 95 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC006960.3-201ENST00000561845 705 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC080078.2-201ENST00000603766 501 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC010591.1-201ENST00000603941 649 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC012443.1-201ENST00000605605 231 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AL161734.1-201ENST00000609720 557 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AL133173.2-201ENST00000614270 90 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 AP000553.6-201ENST00000641242 118 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 USP8P1-201ENST00000494673 3183 ntBASIC3.39□□□□□ -1.87
BEST3Q8N1M1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BEST3Q8N1M1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC138915.3-201ENST00000562908 1389 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC005832.2-201ENST00000538921 1430 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC009812.4-201ENST00000569134 1805 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 XIAPP3-201ENST00000312918 795 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 RNU5E-1-201ENST00000362477 120 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms