Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM48Q8IWZ4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM48Q8IWZ4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM48Q8IWZ4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC021146.4-201ENST00000309229 279 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 Y_RNA.31-201ENST00000362574 102 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-254P-201ENST00000363377 107 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 SNORA70E-201ENST00000384492 135 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-1160P-201ENST00000384546 104 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-1127P-201ENST00000384580 107 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 SDHCP2-201ENST00000398565 501 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 RPS23P10-201ENST00000416185 486 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 RPEP3-201ENST00000425462 676 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC011998.1-201ENST00000433403 117 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 RPL23AP93-201ENST00000440847 484 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC073587.1-201ENST00000447093 876 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 RPS15AP27-201ENST00000449183 343 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC012158.1-204ENST00000483430 465 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC020890.1-201ENST00000491837 504 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC093840.1-201ENST00000511599 336 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC021146.3-201ENST00000511911 260 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 RPL39P5-202ENST00000512505 151 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC093303.1-201ENST00000514549 295 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC026801.2-201ENST00000515352 425 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC100870.1-201ENST00000522035 505 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 COPS8P3-201ENST00000526024 482 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC126177.3-201ENST00000551839 688 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC084783.1-201ENST00000565846 910 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 MIR4277-201ENST00000578298 84 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 IGHV3-29-201ENST00000604817 344 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AC016925.2-201ENST00000605108 242 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 ATP1B3P1-201ENST00000605365 821 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 AL355802.3-201ENST00000607571 545 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 MIR378J-201ENST00000611988 109 ntBASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM48Q8IWZ4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC007823.1-201ENST00000569932 1566 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 RNA5SP447-201ENST00000363749 119 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-82P-201ENST00000363970 107 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 SNORA33.2-201ENST00000365413 134 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 EIF4E2P1-201ENST00000393781 255 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 NDUFS5P1-201ENST00000405668 289 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 RN7SKP158-201ENST00000410453 326 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 C4BPAP2-201ENST00000428434 478 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 ISCUP1-201ENST00000454451 448 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 RPL21P126-201ENST00000470049 478 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 RPL7P23-201ENST00000493874 747 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 RPS27P27-201ENST00000498779 255 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 SNORD116-26-201ENST00000516006 96 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-189P-201ENST00000516120 101 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 IGLVIV-65-201ENST00000517313 360 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC008737.2-201ENST00000599446 118 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AL670379.6-201ENST00000603753 252 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AL670379.1-201ENST00000604752 252 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AL670379.5-201ENST00000605253 252 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms