Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AL451139.1-201ENST00000434718 346 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 HMGB3P11-201ENST00000440127 604 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AP000942.1-201ENST00000463969 747 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 MTND4LP22-201ENST00000508209 276 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 SCARNA15.2-201ENST00000516409 127 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 RNU6-256P-201ENST00000516747 97 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 RNU6-273P-201ENST00000516937 96 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 RANP9-201ENST00000519957 271 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AC133555.2-201ENST00000550213 292 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 PARP1P2-201ENST00000556806 195 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 MIR4277-201ENST00000578298 84 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AL355810.1-201ENST00000614629 552 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AC022418.1-201ENST00000624118 445 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 Y_RNA.28-201ENST00000362554 111 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 Y_RNA.167-201ENST00000363735 109 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 SNORD113.2-201ENST00000364166 89 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 Y_RNA.452-201ENST00000384202 108 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 RNU11-201ENST00000387069 134 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 GPS2P1-201ENST00000411761 986 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AL354868.1-201ENST00000417077 482 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 BX842559.1-201ENST00000419615 532 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 RPL23AP1-201ENST00000428990 471 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 RPL23AP69-201ENST00000431134 458 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 USP9YP7-201ENST00000436723 430 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 RPL23AP89-201ENST00000439324 255 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 USP9YP32-201ENST00000452432 430 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AL135752.1-201ENST00000479477 471 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AP002812.1-201ENST00000495378 474 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AC078918.1-201ENST00000498515 228 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 Y_RNA.682-201ENST00000516457 100 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 RNU6-1073P-201ENST00000517182 106 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AP003122.3-201ENST00000526316 255 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AC027369.5-201ENST00000533838 755 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 APOOP3-201ENST00000536787 586 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 TOMM20P2-201ENST00000540082 421 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AC090115.3-201ENST00000553218 849 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 FKBP1BP1-201ENST00000553366 325 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AL117187.1-201ENST00000555482 181 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 MED28P6-201ENST00000558776 231 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AC004817.2-201ENST00000561794 651 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 ATP5J2P6-201ENST00000565203 266 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AL360012.1-201ENST00000602813 131 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 AP000654.2-201ENST00000605633 586 ntBASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
NPAS4Q8IUM7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 MUC2-202ENST00000613187 4845 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 AL592182.3-201ENST00000642132 3304 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 Y_RNA.193-201ENST00000363979 102 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 Y_RNA.339-201ENST00000365325 102 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 RNU6-784P-201ENST00000384330 106 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 SNORA16.2-201ENST00000390991 127 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 RPL21P66-201ENST00000426566 466 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 SNRPEP4-201ENST00000435815 279 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 MRPS31P2-201ENST00000451581 518 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.23□□□□□ -1.57
NPAS4Q8IUM7 RPL21P93-201ENST00000480465 489 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms