Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 RPL23AP12-201ENST00000467573 473 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 AC005726.1-201ENST00000494679 427 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 AC109445.1-201ENST00000512356 383 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 RN7SKP209-201ENST00000516888 304 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 RANP9-201ENST00000519957 271 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 AC023050.3-201ENST00000541142 333 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 FRG2DP-202ENST00000566967 323 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 AL162413.1-201ENST00000603198 110 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 DPPA3P3-201ENST00000603842 430 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 RNU6-88P-201ENST00000606801 100 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 AC139792.3-201ENST00000623525 224 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 AC079597.1-201ENST00000624306 508 ntBASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
BHLHA9Q7RTU4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC090337.1-201ENST00000579651 2074 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 SNORD9-201ENST00000362566 104 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RNU5E-5P-201ENST00000365379 116 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 Y_RNA.384-201ENST00000383909 102 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RNU6-187P-201ENST00000384139 106 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RNU6-74P-201ENST00000384235 107 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 PTMAP2-201ENST00000397627 327 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 BX295541.1-201ENST00000417774 250 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AL606753.1-201ENST00000427435 87 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 HMGB1P45-201ENST00000435986 653 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 SETP5-201ENST00000437270 562 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 HMGB3P12-201ENST00000438745 556 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 HMGB1P18-201ENST00000438801 619 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 MTCO3P45-201ENST00000443036 613 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RPL7P12-201ENST00000446719 750 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 HMGN2P26-201ENST00000463169 339 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AP002812.1-201ENST00000495378 474 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 HMGB3P15-201ENST00000507326 574 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC104619.4-201ENST00000510773 249 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 SMURF2P1-201ENST00000514992 481 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 Y_RNA.680-201ENST00000516441 93 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RNU6-1004P-201ENST00000516584 111 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AL163153.1-201ENST00000554223 283 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 MIR4429-201ENST00000580105 73 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC020914.6-201ENST00000594327 272 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC011816.2-201ENST00000607089 556 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC096772.1-201ENST00000609146 564 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC107871.2-201ENST00000612894 502 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC022418.1-201ENST00000624118 445 ntBASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BHLHA9Q7RTU4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 AC027290.2-201ENST00000623210 18662 ntBASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 Y_RNA.157-201ENST00000363638 102 ntBASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 RNU5F-7P-201ENST00000363696 115 ntBASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 Y_RNA.197-201ENST00000364004 102 ntBASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 SNORA51.12-201ENST00000384448 134 ntBASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 RNU4-14P-201ENST00000410858 122 ntBASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 AC013404.1-201ENST00000413068 249 ntBASIC3.81□□□□□ -1.8
BHLHA9Q7RTU4 MRPL50P2-201ENST00000416821 482 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms