Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 Y_RNA.689-201ENST00000516589 107 ntBASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 AL355812.1-201ENST00000603215 216 ntBASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 AC104695.3-201ENST00000604052 296 ntBASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 AL034351.1-201ENST00000605288 668 ntBASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 AC091905.4-201ENST00000623432 202 ntBASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 SOCS5P3-201ENST00000425115 1576 ntBASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF111Q6ZNA4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 EOGT-210ENST00000615922 1931 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 SAMMSON-213ENST00000641336 1521 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 Y_RNA.153-201ENST00000363615 91 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RNU6-263P-201ENST00000363811 107 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RNA5SP28-201ENST00000363841 119 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RNU6-190P-201ENST00000384154 102 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RNU6-146P-201ENST00000384602 108 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AL645733.1-201ENST00000402250 217 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 HDGFP1-201ENST00000405943 252 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RNA5SP296-201ENST00000410523 111 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC080125.1-201ENST00000414888 684 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC008065.1-201ENST00000428525 348 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 PSMA2P3-201ENST00000429685 675 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RPL23AP69-201ENST00000431134 458 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 CYCSP43-201ENST00000438233 310 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 HMGB1P12-201ENST00000438594 598 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 CECR9-201ENST00000453421 199 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RPL37P6-202ENST00000464216 403 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RN7SL329P-201ENST00000467740 299 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RN7SL97P-201ENST00000486780 299 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 MTND4LP22-201ENST00000508209 276 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 MYL12BP1-201ENST00000569826 507 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC113195.1-201ENST00000579952 141 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AL669831.4-202ENST00000590817 238 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC004696.1-201ENST00000614345 607 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 AC007998.5-201ENST00000622938 237 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 IRF5P1-201ENST00000504852 2164 ntBASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF111Q6ZNA4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 RNU6-490P-201ENST00000362985 107 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 Y_RNA.645-201ENST00000391229 102 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 RN7SKP167-201ENST00000411047 285 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AF186996.5-201ENST00000418098 904 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC099677.1-201ENST00000420575 175 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC093151.1-201ENST00000427711 313 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC004938.1-201ENST00000438468 308 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 Z98949.2-201ENST00000440996 144 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 U8.20-201ENST00000459445 131 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC022493.2-201ENST00000506122 481 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 MRPS35P2-201ENST00000508242 191 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms