Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC006064.5-201ENST00000541782 248 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC024619.4-201ENST00000580924 316 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC024940.4-201ENST00000605507 246 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC007619.2-201ENST00000605743 379 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC128687.2-201ENST00000609657 566 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 Mico1.1-201ENST00000611698 204 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC090132.2-201ENST00000615881 347 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 uc_338.13-201ENST00000618243 179 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC244205.2-202ENST00000635781 342 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC006504.1-201ENST00000562493 3666 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RNY4P14-201ENST00000363656 96 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RNA5SP175-201ENST00000364275 119 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 Y_RNA.402-201ENST00000383972 102 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 SNORA24.1-201ENST00000384401 135 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RNU6-14P-201ENST00000384630 106 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 MIR493-201ENST00000385254 89 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 SNORD115-47-201ENST00000391226 86 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RPS16P5-201ENST00000406501 404 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 SNORA11F-201ENST00000408237 128 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 TMSB10P2-201ENST00000416049 131 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 YPEL5P1-201ENST00000419731 367 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 MTCYBP5-201ENST00000423752 1135 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RPEP3-201ENST00000425462 676 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 ATP5HP2-201ENST00000433885 485 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AL772161.1-201ENST00000439130 476 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RNU7-63P-201ENST00000459054 62 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AL121769.1-201ENST00000469473 401 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 PPIAP15-201ENST00000479662 484 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RPL36AP51-201ENST00000487216 318 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC105417.1-201ENST00000514691 285 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RNA5SP73-201ENST00000516744 108 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 RN7SKP60-201ENST00000516985 239 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 OR5AL2P-201ENST00000532185 920 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC004024.1-201ENST00000549244 247 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC007621.1-201ENST00000604544 437 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AL110115.1-201ENST00000614396 364 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC034102.8-201ENST00000615146 484 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC025034.2-201ENST00000623264 286 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC140479.6-201ENST00000633535 357 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 U6.114-201ENST00000636407 96 ntBASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNF220Q5VTB9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
RNF220Q5VTB9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF220Q5VTB9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 RNU6-817P-201ENST00000391083 104 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 RNU6-1158P-201ENST00000391167 107 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 PPIAP31-201ENST00000405422 495 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 U3.42-201ENST00000408746 214 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AL161631.1-201ENST00000417933 486 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC245054.1-201ENST00000420944 258 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC091390.3-201ENST00000426478 338 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 RPL23AP1-201ENST00000428990 471 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC011998.1-201ENST00000433403 117 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AL606489.2-201ENST00000433886 234 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 CBWD4P-201ENST00000445695 655 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC087588.1-201ENST00000462203 316 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC083798.1-201ENST00000472671 131 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 RPS20P22-201ENST00000473700 357 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms