Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.62□□□□□ -1.83
RPE65Q16518 AL356535.1-201ENST00000440335 398 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 AL162389.1-201ENST00000449233 177 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 SNRPGP5-201ENST00000456003 220 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 AC068305.1-201ENST00000497406 726 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.62□□□□□ -1.83
RPE65Q16518 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.62□□□□□ -1.83
RPE65Q16518 FTH1P9-201ENST00000513251 355 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.62□□□□□ -1.83
RPE65Q16518 RNU6-1073P-201ENST00000517182 106 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 IGKV2D-23-201ENST00000518179 286 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RPE65Q16518 CCNG2P1-201ENST00000549521 1000 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.62□□□□□ -1.83
RPE65Q16518 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.62□□□□□ -1.83
RPE65Q16518 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.62□□□□□ -1.83
RPE65Q16518 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.62□□□□□ -1.83
RPE65Q16518 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.62□□□□□ -1.83
RPE65Q16518 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.62□□□□□ -1.83
RPE65Q16518 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.62□□□□□ -1.83
RPE65Q16518 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.62□□□□□ -1.83
RPE65Q16518 TUG1_2.1-201ENST00000614234 87 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.62□□□□□ -1.83
RPE65Q16518 AL360181.4-201ENST00000621752 134 ntBASIC3.62□□□□□ -1.83
RPE65Q16518 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.62□□□□□ -1.83
RPE65Q16518 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.62□□□□□ -1.83
RPE65Q16518 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPE65Q16518 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.62□□□□□ -1.83
RPE65Q16518 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPE65Q16518 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.61□□□□□ -1.83
RPE65Q16518 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.61□□□□□ -1.83
RPE65Q16518 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.61□□□□□ -1.83
RPE65Q16518 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.61□□□□□ -1.83
RPE65Q16518 USP8P1-201ENST00000494673 3183 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 RNU6-600P-201ENST00000362524 99 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 SNORA31-201ENST00000362607 130 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 SNORA51.2-201ENST00000364595 132 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 RNA5SP51-201ENST00000364750 119 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 RNA5SP107-201ENST00000411358 122 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AMD1P2-201ENST00000412936 992 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 RPL21P24-201ENST00000413752 448 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.61□□□□□ -1.83
RPE65Q16518 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 DUTP6-201ENST00000425573 462 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 MTCO1P39-201ENST00000426148 480 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 RPL21P66-201ENST00000426566 466 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AC073464.1-201ENST00000429823 534 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.61□□□□□ -1.83
RPE65Q16518 AC024082.2-201ENST00000434771 238 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 AF228730.2-201ENST00000438784 848 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.61□□□□□ -1.83
RPE65Q16518 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.61□□□□□ -1.83
RPE65Q16518 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.61□□□□□ -1.83
RPE65Q16518 AC007537.2-201ENST00000472093 511 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 RPL31P13-201ENST00000484151 370 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 HMGB1P29-201ENST00000505659 499 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.61□□□□□ -1.83
RPE65Q16518 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.61□□□□□ -1.83
RPE65Q16518 RN7SKP244-201ENST00000516513 307 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 RNU6-64P-201ENST00000517119 105 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 OR5D17P-201ENST00000531492 978 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AP004242.1-201ENST00000533701 349 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.61□□□□□ -1.83
RPE65Q16518 AC136619.2-201ENST00000563361 631 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.61□□□□□ -1.83
RPE65Q16518 MIR4429-201ENST00000580105 73 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.61□□□□□ -1.83
RPE65Q16518 AP000860.1-201ENST00000605250 559 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AC012443.1-201ENST00000605605 231 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 AC004067.1-201ENST00000608733 700 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.61□□□□□ -1.83
RPE65Q16518 AL136313.1-201ENST00000624804 202 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.61□□□□□ -1.83
RPE65Q16518 SEPT14P19-203ENST00000633205 211 ntBASIC3.61□□□□□ -1.83
RPE65Q16518 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.61□□□□□ -1.83
RPE65Q16518 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPE65Q16518 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
RPE65Q16518 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RPE65Q16518 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPE65Q16518 U3.11-201ENST00000364476 212 ntBASIC3.6□□□□□ -1.83
RPE65Q16518 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPE65Q16518 SYF2P2-201ENST00000417620 583 ntBASIC3.6□□□□□ -1.83
RPE65Q16518 DPPA2P1-201ENST00000428060 556 ntBASIC3.6□□□□□ -1.83
RPE65Q16518 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.6□□□□□ -1.83
RPE65Q16518 MTND3P21-201ENST00000433774 331 ntBASIC3.6□□□□□ -1.83
RPE65Q16518 USP9YP28-201ENST00000435142 589 ntBASIC3.6□□□□□ -1.83
RPE65Q16518 AL451074.3-201ENST00000437709 472 ntBASIC3.6□□□□□ -1.83
RPE65Q16518 AC005094.1-201ENST00000440420 368 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms