Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 HMGN2P7-201ENST00000456186 273 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 RPL7L1P8-201ENST00000469911 741 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 RPS27AP1-201ENST00000475545 471 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 RNU6-1256P-201ENST00000516539 103 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AP003392.2-201ENST00000527269 208 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AC011979.2-201ENST00000527568 352 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC093012.1-202ENST00000549403 582 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC245014.2-201ENST00000603689 287 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AL136363.2-201ENST00000604173 851 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AC246785.4-201ENST00000605374 287 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 MIR98-201ENST00000606724 119 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AL161734.1-201ENST00000609720 557 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 MIR6875-201ENST00000617506 72 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CL1P78423 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CL1P78423 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CX3CL1P78423 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CL1P78423 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CL1P78423 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CL1P78423 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CL1P78423 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
CX3CL1P78423 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CL1P78423 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CL1P78423 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CL1P78423 HSPE1P11-201ENST00000339579 310 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 SNORD56.2-201ENST00000363242 71 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 SNORD6-201ENST00000365444 73 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 RNU6-1042P-201ENST00000384204 107 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 RNU6-39P-201ENST00000384344 107 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 MIR199A2-201ENST00000385289 110 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 Y_RNA.582-201ENST00000391023 95 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 RN7SKP140-201ENST00000411196 284 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC009237.5-201ENST00000414271 501 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AL451054.2-201ENST00000420896 202 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 NDUFB4P7-201ENST00000423198 363 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 FCF1P1-201ENST00000432690 571 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 CR848007.1-201ENST00000442354 1699 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CL1P78423 SNRPGP6-201ENST00000451124 220 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 RPS20P20-201ENST00000460498 340 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 RPS23P3-201ENST00000470993 430 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC004924.1-201ENST00000480160 781 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 VN1R105P-201ENST00000486595 910 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 KCTD9P5-201ENST00000504141 1170 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 RNU1-61P-201ENST00000516107 151 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AP001804.3-201ENST00000525146 880 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AC004024.1-201ENST00000549244 247 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CL1P78423 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CL1P78423 RPL23AP84-201ENST00000571193 464 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CL1P78423 MIR4286-201ENST00000580651 93 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC053481.4-201ENST00000583164 216 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC068790.2-201ENST00000602601 557 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AL136363.1-201ENST00000605349 337 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AC012531.5-201ENST00000611375 151 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 AC084782.3-201ENST00000612282 578 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 RNVU1-4-201ENST00000612985 164 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CL1P78423 AC068880.5-201ENST00000624331 290 ntBASIC3.06□□□□□ -1.92
CX3CL1P78423 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms