Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.61□□□□□ -2.15
UBA52P62987 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.61□□□□□ -2.15
UBA52P62987 HMGB3P17-201ENST00000504195 649 ntBASIC1.61□□□□□ -2.15
UBA52P62987 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.61□□□□□ -2.15
UBA52P62987 AC108729.3-201ENST00000513484 108 ntBASIC1.61□□□□□ -2.15
UBA52P62987 SNORA31.23-201ENST00000517219 133 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AC022634.1-201ENST00000520765 532 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.61□□□□□ -2.15
UBA52P62987 AC044913.1-201ENST00000557200 430 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AC023824.2-201ENST00000566185 400 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.61□□□□□ -2.15
UBA52P62987 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.61□□□□□ -2.15
UBA52P62987 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
UBA52P62987 SDR42E1P2-201ENST00000614861 481 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AC092650.2-201ENST00000619984 902 ntBASIC1.61□□□□□ -2.15
UBA52P62987 SDR42E1P4-201ENST00000620894 481 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AL158801.5-201ENST00000623123 465 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AP005901.5-201ENST00000545779 1796 ntBASIC1.61□□□□□ -2.15
UBA52P62987 SGO1P2-201ENST00000429458 1589 ntBASIC1.6□□□□□ -2.15
UBA52P62987 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UBA52P62987 RNU6-1293P-201ENST00000384077 107 ntBASIC1.6□□□□□ -2.15
UBA52P62987 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
UBA52P62987 Y_RNA.595-201ENST00000410403 105 ntBASIC1.6□□□□□ -2.15
UBA52P62987 VTA1P1-201ENST00000414044 866 ntBASIC1.6□□□□□ -2.15
UBA52P62987 AL592045.1-201ENST00000429867 352 ntBASIC1.6□□□□□ -2.15
UBA52P62987 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.6□□□□□ -2.15
UBA52P62987 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.6□□□□□ -2.15
UBA52P62987 RN7SKP210-201ENST00000459176 261 ntBASIC1.6□□□□□ -2.15
UBA52P62987 RPL31P41-201ENST00000477967 372 ntBASIC1.6□□□□□ -2.15
UBA52P62987 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.6□□□□□ -2.15
UBA52P62987 AC110588.1-201ENST00000559699 137 ntBASIC1.6□□□□□ -2.15
UBA52P62987 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.6□□□□□ -2.15
UBA52P62987 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.6□□□□□ -2.15
UBA52P62987 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.6□□□□□ -2.15
UBA52P62987 AC012213.4-201ENST00000606457 354 ntBASIC1.6□□□□□ -2.15
UBA52P62987 RNU6-156P-201ENST00000621869 107 ntBASIC1.6□□□□□ -2.15
UBA52P62987 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.6□□□□□ -2.15
UBA52P62987 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
UBA52P62987 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBA52P62987 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.59□□□□□ -2.15
UBA52P62987 RNU6-14P-201ENST00000384630 106 ntBASIC1.59□□□□□ -2.15
UBA52P62987 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.59□□□□□ -2.15
UBA52P62987 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.59□□□□□ -2.15
UBA52P62987 RPL31P63-201ENST00000422565 375 ntBASIC1.59□□□□□ -2.15
UBA52P62987 IFNA20P-201ENST00000436840 528 ntBASIC1.59□□□□□ -2.15
UBA52P62987 ARF4P4-201ENST00000439608 520 ntBASIC1.59□□□□□ -2.15
UBA52P62987 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.59□□□□□ -2.15
UBA52P62987 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
UBA52P62987 NAP1L1P3-201ENST00000462291 880 ntBASIC1.59□□□□□ -2.15
UBA52P62987 RPS29P20-201ENST00000489592 171 ntBASIC1.59□□□□□ -2.15
UBA52P62987 RPL23AP63-201ENST00000498752 471 ntBASIC1.59□□□□□ -2.15
UBA52P62987 Y_RNA.673-201ENST00000516306 88 ntBASIC1.59□□□□□ -2.15
UBA52P62987 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.59□□□□□ -2.15
UBA52P62987 AC139103.1-201ENST00000534696 1030 ntBASIC1.59□□□□□ -2.15
UBA52P62987 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.59□□□□□ -2.15
UBA52P62987 MIR4498-201ENST00000577599 66 ntBASIC1.59□□□□□ -2.15
UBA52P62987 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
UBA52P62987 AC244517.12-201ENST00000623581 663 ntBASIC1.59□□□□□ -2.15
UBA52P62987 AC116618.1-201ENST00000634617 774 ntBASIC1.59□□□□□ -2.15
UBA52P62987 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
UBA52P62987 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
UBA52P62987 MTND4P27-201ENST00000450813 1354 ntBASIC1.59□□□□□ -2.16
UBA52P62987 AL390862.1-201ENST00000635467 1469 ntBASIC1.58□□□□□ -2.16
UBA52P62987 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.58□□□□□ -2.16
UBA52P62987 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBA52P62987 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.58□□□□□ -2.16
UBA52P62987 RPS20P15-201ENST00000412792 311 ntBASIC1.58□□□□□ -2.16
UBA52P62987 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.58□□□□□ -2.16
UBA52P62987 AC027124.2-201ENST00000428249 105 ntBASIC1.58□□□□□ -2.16
UBA52P62987 AL590762.3-201ENST00000436372 640 ntBASIC1.58□□□□□ -2.16
UBA52P62987 OSTCP8-201ENST00000445117 448 ntBASIC1.58□□□□□ -2.16
UBA52P62987 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.58□□□□□ -2.16
UBA52P62987 AC010099.1-201ENST00000455434 375 ntBASIC1.58□□□□□ -2.16
UBA52P62987 ATG12P2-201ENST00000456830 416 ntBASIC1.58□□□□□ -2.16
UBA52P62987 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.58□□□□□ -2.16
UBA52P62987 BZW1P2-201ENST00000473537 826 ntBASIC1.58□□□□□ -2.16
UBA52P62987 RPL7P18-201ENST00000478965 734 ntBASIC1.58□□□□□ -2.16
UBA52P62987 COL6A4P2-205ENST00000509855 506 ntBASIC1.58□□□□□ -2.16
UBA52P62987 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.58□□□□□ -2.16
UBA52P62987 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
UBA52P62987 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.58□□□□□ -2.16
UBA52P62987 COX6CP5-201ENST00000527162 228 ntBASIC1.58□□□□□ -2.16
UBA52P62987 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.58□□□□□ -2.16
UBA52P62987 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.58□□□□□ -2.16
UBA52P62987 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.58□□□□□ -2.16
UBA52P62987 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.58□□□□□ -2.16
UBA52P62987 AC010928.2-201ENST00000588017 287 ntBASIC1.58□□□□□ -2.16
UBA52P62987 AC023043.2-201ENST00000589678 1026 ntBASIC1.58□□□□□ -2.16
UBA52P62987 KATNBL1P1-201ENST00000605192 748 ntBASIC1.58□□□□□ -2.16
UBA52P62987 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBA52P62987 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
UBA52P62987 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBA52P62987 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.57□□□□□ -2.16
UBA52P62987 SNORA68.1-201ENST00000364537 132 ntBASIC1.57□□□□□ -2.16
UBA52P62987 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBA52P62987 CIR1P3-201ENST00000405137 479 ntBASIC1.57□□□□□ -2.16
UBA52P62987 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.57□□□□□ -2.16
UBA52P62987 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
UBA52P62987 RPL35AP22-201ENST00000436855 335 ntBASIC1.57□□□□□ -2.16
UBA52P62987 AL645638.1-201ENST00000440519 361 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms